Gene Plim_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3141 
Symbol 
ID9139855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4061404 
End bp4062747 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content53% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003631155 
Protein GI296123377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCCA CCACAATTCT TAACTGCAGC AGATGGATTT TTTGTCAACT CCGACACGGA 
TTCCTGACTT TCACTCTCTT GATGTGCTCT GCTTTCACAT CGATCACAGC TCTGGCAGAC
GAACTGAAAG TCGACGAAGT GCAGCGGTTG ATTGATGCCT ACACCCGCAA GCATCCCGCT
GCCGTTGTCG CAGCTAAAAT CATCCGGCCC GCAGGTGACC TCTATGTGAC TTCCGGAGAG
TTCATTCCTG AGGAAGTCCT CCGAACTGAC AAGTCCAGCA CTGAAAGATC TGACACTCAA
AAACCCAATG ACAAACCAGC ACGTTCCGCT GATGAACATT CCCTCTTTGC CCTGGCCTCG
GTGACCAAAA CCTTCACTGG GGTCCTTCTG GCACTTCTTG CCGAAAAGCA GGTTCTCTCC
CTCGGGGATC CTGCCGTCGA TTATCTGCCG CAAGCCTGGA AGCTCCCGAG CGAACATCAG
GCGGGTATCG AGCGAAAAAT CTCACTATTG GAACTGGCCA CACACTCATC CGGCCTTCCT
GTCCAACCGC CAGATATTGT GAGTTTTGCC AGGCAACACC AGACCGAAAA CAATCCCTAT
TCTCTGTATG ACCGCAAGGC TCTCGAACAG TCTCTTCCCG GAGTCAAGCT CAGCCATCCG
ATGGGCGAAA AGTACCTCTA CTCGAATCTG GGGATGGGCC TGTTAGGGCA TGCACTGGCC
AATGCGACCA ACACCGCGAC CTTTGAATCC GCTTTACAGA CTCATCTGCT GGAACCACTC
GAGCTTCACG AGACGAGGGT CCATTTAACA CCAGAAATGC AGACGCGACG AGTTCCGACT
TTCAATCAAC AAGGGATCGC TGCACCCACC TGGTCGTTTG CGACTTTAGA AGCCTGTGGC
GGGCTCCACT CCTCCATCCA TGATCTGACA AGGTGGGTCA AAGCCCATTT TCCACCCCCG
AAAGATACTG AGAATCCCAA CACCGACGAA AGCCTGCTTC CACAGCGACA CTCTTCCCCA
GAGATTTCCG CTGCGTTCGC CAACAGTTTA AAGACTCATT TTCCCCAACA TCCCGACCCG
TTGTCGAAAA AGCTTCAAAT GGGACTGGGA TGGCACTTGA TAACCATTCC TCTGCCGAAA
AACACGATGC CCGACAACCA CAAAAATGAA CATCGCCCCA GCAGGAAAAG GATCGCTTTT
CACGCTGGGG CGACAACCGC CTCAAGAAGT TTTGTCGCTC TCGATGCCGA ACATCGTGTC
GGTGTGATTC TGCTGGCCAA TGTCCCGCAT TCGCTGGACG ATATCGGCAT CCAACTGATG
CAGCGATTAC TGACCCACGA ATGA
 
Protein sequence
MPSTTILNCS RWIFCQLRHG FLTFTLLMCS AFTSITALAD ELKVDEVQRL IDAYTRKHPA 
AVVAAKIIRP AGDLYVTSGE FIPEEVLRTD KSSTERSDTQ KPNDKPARSA DEHSLFALAS
VTKTFTGVLL ALLAEKQVLS LGDPAVDYLP QAWKLPSEHQ AGIERKISLL ELATHSSGLP
VQPPDIVSFA RQHQTENNPY SLYDRKALEQ SLPGVKLSHP MGEKYLYSNL GMGLLGHALA
NATNTATFES ALQTHLLEPL ELHETRVHLT PEMQTRRVPT FNQQGIAAPT WSFATLEACG
GLHSSIHDLT RWVKAHFPPP KDTENPNTDE SLLPQRHSSP EISAAFANSL KTHFPQHPDP
LSKKLQMGLG WHLITIPLPK NTMPDNHKNE HRPSRKRIAF HAGATTASRS FVALDAEHRV
GVILLANVPH SLDDIGIQLM QRLLTHE