| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3111 |
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| Symbol | |
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| ID | 9139825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 4028016 |
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| End bp | 4028960 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003631125 |
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| Protein GI | 296123347 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.406543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGT CTCCCTCGCC AACACCTGCC AGCAGCGGTC CGAATCAGCA GCCGTTTTCC
TCGCATTTCA TGTCGAAATA CGTTCAGCCG GCGGTCTCTG ATCGTGACTT CAGAAATGTC
GAATACCGCC TCCATAACCG CAGATCTGTG GCCCTCTATC GCTGCTCTCG GGATTTCGCC
ACACCTTCGA CTCCCAAGCC CGATTTCATG CTCAGGCTGC ATCTCAATAA GTTCCCCGCA
CAGCATGAGG TCAACTACGG CGGTGGCTGG CTGAAACGCA TGCCCGATTC CTATGTTCTC
GCACCACCAA ACGTCGATTC CCGTGTTCGC GGGAACCTCC AGAACCATTT CACCAGCCTC
ATTCTGGTCT TCCCCGAAAC AGAACTCCGG CAAGTCGCCG GGGAGCTTCT TGACGCTGAG
GGTAAACACC TATGGCAACC ACCATCGAAA GAACTCCACG ATACATCGAT CTCAACGTTG
ATGAGGCAAC TGTGGGAGTC TTCCTGCAGT TCGGCACCGG CCGAATCTGT GTTGATCGAG
GGGACATTTA TTTCTCTTGT GGGTCGCCTG TTACTCTCCG GACAGCAGAA ACGACTGGCC
ATTCCCAAAT ATGAAAGCAG TGCTTCGCTC ATCACCAGCA AAGCTCTGAA CTACATGCAG
GATCGTCTCA GCGAAAAACT GACGCTGGAA GAGATTGCCA AGGCTGCCGG GGTCAGCCGC
TCGTACCTCA TTCGCGTCTT CGCTCAAGCG ACAGGTAAAA GTGTGCACGC CCGCCTGATT
GAACTTCGTA TCGAGCGAGC CAAACAGCTC CTGATTCAGT ATGGCCGCAA TATGACTCTC
GACCAGGTGG CTTTAGCCTG CGGATTCTGG GATGGCACGC ATCTGACTCG CTCATTTTTT
GAGCATGTAG GCATTACTCC CCAGCAGTTC CGCGAGAACT CGTGA
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| Protein sequence | MNQSPSPTPA SSGPNQQPFS SHFMSKYVQP AVSDRDFRNV EYRLHNRRSV ALYRCSRDFA
TPSTPKPDFM LRLHLNKFPA QHEVNYGGGW LKRMPDSYVL APPNVDSRVR GNLQNHFTSL
ILVFPETELR QVAGELLDAE GKHLWQPPSK ELHDTSISTL MRQLWESSCS SAPAESVLIE
GTFISLVGRL LLSGQQKRLA IPKYESSASL ITSKALNYMQ DRLSEKLTLE EIAKAAGVSR
SYLIRVFAQA TGKSVHARLI ELRIERAKQL LIQYGRNMTL DQVALACGFW DGTHLTRSFF
EHVGITPQQF RENS
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