| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3081 |
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| Symbol | |
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| ID | 9139793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 3989938 |
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| End bp | 3993564 |
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| Gene Length | 3627 bp |
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| Protein Length | 1208 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003631098 |
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| Protein GI | 296123320 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTC CCGCTTTAAT CAGACACTTG TTTCGCCAGG ATGTCACTCG CGACATTCCT
CCGGTGGTGT ATTTTCACGA GCAGAGTCCT GGAAAGGTTC AGGACGAAGT CTCGGAGTAC
ATTATCACTG GTGGTTGGAA CAAAGATCAT CCCAACTTCA AACGAGTGCC TGATGGAATT
CACGAGCAAT ACGTCAGGCT GCTGAACGCC ATTTCCCGCG AGATGGAAAA GAATGGCGGC
CCCTCGCTGC CTGCAGCATG GATCTCCGGA TTCTATGGCT CTGGTAAATC CAGTTTTGCC
AAACTGCTGG GGCTGTCGCT GGATGGGCTT GAACTGCCCA ATGGCCAGTC GCTGGCCGAA
GCGCTACTGG CGCGTGACCT GTCTGATCGA GCACAGGAGT TTCGCGACGC CTGGAAGAAG
CTGCGGCAAC TGATCGCCGA ACCGTTCGCC GTGGTGTTCG ATATCGGTGG ATTTGCCAGG
GACAACGAAC ACATTCACAC GGCCTGTGTG CGTCAGGTAC AAAAGCGACT CGGATACTGT
GCGAATCTGC CGTTGGTGGC CAACTTCGAA CTGCGTTTGG AAAAGGCTGG CGAATGGACG
CGGTTCCTGG AGGTGTCTGA CCAGATCGGT CACCCCTGGG AACAGGAAAA GGACCAGCCG
TTTGCCGACG AAGTCTTCTC CGAAATCCTG CATCACTTCG ACAAAGACCG CTACACCAAT
CCGATGAGCT GGATCGACAG TCGGGCCGGG ACGACGGTGA CCGACTCCCC CACCGAAGCA
GTCTGTGCCA TCAGTGACAT GATGCGGCTT CGCAAACCCG ACGGCACTTT GTTTATCGTC
GTGGACGAAG TCTCGCAGTA CGTGCTGTCT CACGAGCAGC GGGTCGACAA GTTGAGGGCA
TTTGCATCTG AGCTCGGTAG CCAGTTGAAG GGCAAAGTCT GGCTGCTTGC GTTGGGTCAG
CAAAAGATCG ATGAGGACGC GGGCGACGCT TTCCTCGTCT GGGCCAAGGA TCGTTTTCCA
CAGCAGCTCC GCGTCCATCT TGCCGCCACG AACATCCGGG ACGTCGTCCA TCGCCGGTTG
CTGCAGAAGA CCGAAGCGGG CGCGAAGGAC CTTCGCAAGC GATTCGAGAA ACATCGGCCG
GATCTCAAGC TCTTTGCGTT CGGCTGTGAA GACGTCTCTG CTGACGAGTT CGTTGAAGTC
TACCCGTTGC TCCCAGGCCA AATTGATTTG CTGCTGCAAA TCACCAGTGC CATGCGCATC
CGGTCGGCTC GCGCCCAGGG AGACGATCAG GCAATCCGTG GTCTGTTGCA GCTGTTGGGT
GAGCTGTTTC GTGACCAGAA TCTGGCCGAT CTGCCCGTTG GCAACCTGAT CACACTCGAC
ACGATTTACG AGATTCAAAA AACCGCGCTC GATTCCGATA CGCAGGCCAG CATGGCCCGC
ATCCTGAACG AAACCGCCAA CCGTGCTCCT ATGCTGCAGC GCGTTGCAAA GGCGGTCGCT
CTGCTCGAAC TGATTCAGGA TACCCGACCG ACCGACGCCA AGCTGGTTGC CCAGTGCCTG
TACGATCGCA TGGATCGCGG CAATCAGGTC AACGAAGTCA CAGAAGCGCT CGAAGAACTC
CGTCGTGATA ACCTTCTTGC CTTCTCCGAA AAGCTGGGCT ACCGCATCCA ATCGACGGCT
GGTGAGGAGT GGGAACGCGA GAAACGTGAG ATTCGCGCTT CCCGTGAAGT CATCAGTGAA
ATCATTCGCG ATGCCTTGCA GATGGTGATG GAGAAACCGG AAAAGCCCGC CTTCAAAAAA
CGGCCATTTC CCTGGGCCGC TCTCTTCTCT GATGGCAAGG GCATGGATGA CGACAAGCTG
GTGCGTGCCA AGGACGAAGC CGTCGTCTGT GTCGACTTCC GTTTCGCCCA GCCCGATGAA
CGATCAGAAT CGGTTTGGAT TGAACGCAGC AACGAAGTGA ATCTTCACGA CCGCCTGATC
TGGGTGTGCG GCGACACTAA CGACCTGACC GATCGGGCGC GTGCGTTGGC CCGCGCCCGA
GGAATGGCCA AGCGATATGC TCCCCGCCGC GATTCCCTCA GTGAGCAGCG AAAACTGCTC
CTGCAGCAGG AAGAGGTCAA ATCCGAAACG CTGGAATCGG ACATCCAGGA CATTGTGGAG
TCCGCCTGGC TGGCCGGTAC CATCTACTTC CGGGGCAAGA CTTACAAGCC GGACGACTTC
GGCAGCAAGT TTGCCGGCGC ACTGCTGAAG GTCGCTGAAC GAGTCATGCC GATCCTGTAC
AAGGAATTTG ATCCGATCAC CCTCCAGCCA TCGGAACTGG ATCAGTTGCT GATTCAGGAA
CTCAGCGGTC CGTCGACACG GTTTCTCAAG GATGAACTCG GCATTCTGGA ACTCGATGCC
GGCAAATACG TCCCCACCTG CAGCGGCCTG ATCCCCACGC GCATTCGCGA ACTGATCGAA
TCCGAAGACG GTGCCACCGG TGCTCATCTC CTCTCGAAGT TCGCTGGCCC GCCTTATGCC
TACCAGGCCG AAGTCATTAA AGCCTGCGTC ATAGGGCTGC TGCGTGGCAG CAAAATTAAA
ATCGAAGATG GCGAAGGGAA CGAAATCACC GCGGTTCGCG ATGCCGGCGT GCGAGACGTC
TTCGAGAAGC CTACCGCCTT TCGCAAGGCT CAGTTCATCC CGGTGGGAGA CGACGACATC
GGTGTGCGGG CACGGGCTCG GATCTGCAAG TTCTTTGATG AGCAACTCGG CACGCCGCTC
GATCGTGAAG ACAACGCGAT CGCCGATGCC GTGGAGAAGA AGTTTCATCC GCTCGCGTCC
GATCTGCGCG ACGTCCTGGT GCGGTTTGAC CGCGTGCCCG GCAATCGGGA GACCCCGACG
GAACTCACCC GACTCAATTC TGCTCTGGAA CAGTGCCTTT CCAAAATCCG TAACACAAAG
GAAACCCTCA AGCGGGTGAA GAAGCATCTC GACGATCTGG TCGACGGTGT CAAGCTGCTT
AAACGCTTTG GGGCCGAACT GACCGAAGAC TCGCTGCGCC TGCTTCGCGA TGCCCACAAC
GTCGCCACGA ATCAGGCCGC CCAGTTGCGC GAACTCGGTA CGCTGACCGG CCCCGCCCAG
GAATGCGCCG AGCGGATTGC CGAACAACTC GCTTCGTCGC GTCCGTGGGT GGATGCCCTG
GCGATTCAAC CGGATCTCGA TGTGGTCTGT CAGGCCTACC GCGAGGAACG GACTCGTCTA
TTGGAATGGC AGGAGCAACA GGCTGAACAG GCGCGGGCCC GTATCCGGAT GCGGGATGGC
TACAGTACGC TCCCCTCAGA GAAAGGACAC AACGTCCTTC GGCCCATCAA CAACTCATGT
AGCGACACCA CCGCGGCGGC CATCGCCCCG GCGCTGCGGG ATCTCAAGGA TCCGTTCACC
GTCCGGCTGC AGGCCGCCGA GGAGCAGGCG AACAGGCTGC TGGATGAGTA TCTCAGCGGA
GGATCGAAGC CGATGATCGT CCCGGTCGAT CTTTCGTTGC ACAACCGGGA AATCAAATCG
GAAGCCGACG TCGACGCCCT GGTCGAAGAG ATTCGCGAAC GCCTGCTGCA GCAACTGCGG
AGCGGTCAGC GAATCCGGTT GTTGTAG
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| Protein sequence | MSSPALIRHL FRQDVTRDIP PVVYFHEQSP GKVQDEVSEY IITGGWNKDH PNFKRVPDGI
HEQYVRLLNA ISREMEKNGG PSLPAAWISG FYGSGKSSFA KLLGLSLDGL ELPNGQSLAE
ALLARDLSDR AQEFRDAWKK LRQLIAEPFA VVFDIGGFAR DNEHIHTACV RQVQKRLGYC
ANLPLVANFE LRLEKAGEWT RFLEVSDQIG HPWEQEKDQP FADEVFSEIL HHFDKDRYTN
PMSWIDSRAG TTVTDSPTEA VCAISDMMRL RKPDGTLFIV VDEVSQYVLS HEQRVDKLRA
FASELGSQLK GKVWLLALGQ QKIDEDAGDA FLVWAKDRFP QQLRVHLAAT NIRDVVHRRL
LQKTEAGAKD LRKRFEKHRP DLKLFAFGCE DVSADEFVEV YPLLPGQIDL LLQITSAMRI
RSARAQGDDQ AIRGLLQLLG ELFRDQNLAD LPVGNLITLD TIYEIQKTAL DSDTQASMAR
ILNETANRAP MLQRVAKAVA LLELIQDTRP TDAKLVAQCL YDRMDRGNQV NEVTEALEEL
RRDNLLAFSE KLGYRIQSTA GEEWEREKRE IRASREVISE IIRDALQMVM EKPEKPAFKK
RPFPWAALFS DGKGMDDDKL VRAKDEAVVC VDFRFAQPDE RSESVWIERS NEVNLHDRLI
WVCGDTNDLT DRARALARAR GMAKRYAPRR DSLSEQRKLL LQQEEVKSET LESDIQDIVE
SAWLAGTIYF RGKTYKPDDF GSKFAGALLK VAERVMPILY KEFDPITLQP SELDQLLIQE
LSGPSTRFLK DELGILELDA GKYVPTCSGL IPTRIRELIE SEDGATGAHL LSKFAGPPYA
YQAEVIKACV IGLLRGSKIK IEDGEGNEIT AVRDAGVRDV FEKPTAFRKA QFIPVGDDDI
GVRARARICK FFDEQLGTPL DREDNAIADA VEKKFHPLAS DLRDVLVRFD RVPGNRETPT
ELTRLNSALE QCLSKIRNTK ETLKRVKKHL DDLVDGVKLL KRFGAELTED SLRLLRDAHN
VATNQAAQLR ELGTLTGPAQ ECAERIAEQL ASSRPWVDAL AIQPDLDVVC QAYREERTRL
LEWQEQQAEQ ARARIRMRDG YSTLPSEKGH NVLRPINNSC SDTTAAAIAP ALRDLKDPFT
VRLQAAEEQA NRLLDEYLSG GSKPMIVPVD LSLHNREIKS EADVDALVEE IRERLLQQLR
SGQRIRLL
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