| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3079 |
|---|
| Symbol | |
|---|
| ID | 9139791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3982737 |
|---|
| End bp | 3985652 |
|---|
| Gene Length | 2916 bp |
|---|
| Protein Length | 971 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | PglZ domain protein |
|---|
| Protein accession | YP_003631096 |
|---|
| Protein GI | 296123318 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.237355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC TCTTTGGGCC AGTTTCTCGT TTGCTGGAAG CCGAAGTCCG TGACTGGGTG
ACGAAACACA ACCTCGTCTT CTGGCTGGAC ACGGGCAGCC ACTACGTCGA TCTCGTGAAC
CAGCTCCGCG CGCTGCGGAA ACAGGGAGAA TTGAAGTACG ATATCTACAC CTTCAACGGC
AGCTTTCTTG AAATGCTCTT TGAGCTGGAA GAGGTGATGG GGGGCGTCGA TGCGACGCGG
GCCGTGATCC ATTTGCCGGG CTTCAACGAA GAACTGGTCA AAGCGACCCC GCTGCTGGAG
CTGTACAAGG CGGGTGCGCG GTATCGCAAG GCCCTGGAGA CGCTGGTCCG CGATGCGGCC
GCGGGCAAGG TGCGTCCCGA TCAGATTGAT GAGTTCCTGC AGCGCGGCAA TTTGTCGCTG
GCAGGGGCGG ACATGTGGCT ACACGATCTG CAGTCAACAG GCGCGGAAGG TCTGGCCAGC
CAGTTACGCA ACGTCTCGCT AAACGAACTG GTCGACGACC TGCTTCTGAA CCGGTCGCTA
GCCCAGCGGA TCGCGACGAT CGATCTTCGC GCCGGGACAA TCTCTGATGG GGACCCAAGG
GCGATCCGGG ACCGGATCGT GTCGCTGACC GGGATGCCAG AGTCGTGGTT CGACGTGAGC
CTGCAAAACT CTTTCTCCAG CGGCGCGGAA CCGACCTCCG TGGAAGCCGT CGCGTATGCC
ATCTGCAGTT GGGCCGCCTG CGTCAGTTAT GTTCACGACC TACTGGTGCC CCCTCTTTCC
CCACTGCTGG AACCGGTCCC CCGTCTGCCG CAACTCGTGC GGGACACCTG CCACGAACTG
GTGGTCCATC TGCAGAACGG GAACGAACGC CAGCGATCGT TCTACCGTCA GATGGCCCTG
GAAACAGAAC TCCGGTTGAC CGACGACGTG GGTCAAATTG CAGCTACCGA CCTGGGACGA
TTCGACACAT TCTATTTTGA AGAGGAGACC ATCCTTAAGG CGTCCTTGCA GGCTCTGCAG
GACCGGCGCT GGGACGCAGC CCAGGATTGG GCCAGCCGAC GCAGTGATCC CAATTCATTC
TGGTTGGTTG ACGACGCGCT GCGGAGAAAC GTCTGGCAAC TGGTCGCGGG TGCGGCACGG
CTGGGAGTCG CCATTCAGAC GGCTGGTCCC GCGCTCAAGG CGACCGACAG TGTCGCGAAC
GCCGCTCAGG AATACGTGCA GCTTGGAGCG AAAGTCGACC AGGCCCAGCG TCACCTGGAA
CAGGATCGTC AGAAACTGCT GCGATCCCAA ATGCCGGAAT TCGAGCAGGT CCGCTCCGTG
CTGGACCAGA TGCAGATCGT CTGGCGTGAC TGGGCCAACA GCTGGGGCCA GGGGTTCAAT
GCCGTCTGCA AGACGCATGG ATTTCTGCCT GACTCGTCCC TGCAACAACG CACTCTGTTC
GACGAGACCG TGAAGCCGCT GACAGCCGGC GATGGAATCA CCGCGTACTT TGTCGTCGAT
GCCTTGCGGT ACGAAATGGG TCAGGAGTTG CTGGAGTCGA TCGGAGACAC CGCCAAGACG
GACGTAAAGC TGGACTGGCG GCTTGCAGAA TTGCCGACAG TTACGGAAGT CGGCATGAAT
GTCCTTGCCC CGGTCGCCAA AGGAAGCAAA CTTCAACCAG AGATCTCCAA TGGCCGCATT
GCTGGATTCT CGACGGGTGA GTTCCGTGTC CATGATCCGG ACACACGGCG CAGAGCCGTG
CATGACCGGG CTGGCGGACG GACGTGTCCG CGCATCGAAC TTGAGGAAGT TCTTCGCCTG
GAAGCTATCA CGTTGCGGAG AAAAATTGCT GGCGCCAGGT TGGTCATGGT TCACAGCCGA
GAGATCGACA ATTCGGGCGA GGCGGGTTTC GGACCATCGG TGTTTGAAAC GGTGCTCAAG
GATCTTCGCT CGGCCTGGCA TCTGCTGCGC GAGGCCGGCG TTCGGCACTT TGTCTTCACT
GCCGATCATG GTTTCCTGTT GGTGGACGAA AACTCGCACA CGGCGCAATC ATATGGTCGT
AAAATCGACC CCCATCGTCG GTACGTGATT GCGGACCGGG CTGCCAATCA TTCTGGCGAA
GTGCGGGTTG CCCTGCGCGA CCTCGGCTAT GACTGCGATG ATCTACACCT GATGTTCCCT
GAAAGCGTGG CGGTATTTGA TACTGGTAAG CAGCGCAAGG GTTTTGCCCA CGGTGGAAAC
AGTTTTCAGG AAAGGGTGAT ACCAGTGCTG AAGATCTCGC ACCGAGTGGC AGTGGGTGGT
AACAGTACTG TGTACAATTT GAGTGCAGCA CGCAAACCAG CCGTCGCCGG AATGCATTGC
CTCGCCGTCC GTGTGGCCCA CGCTTCAGGT AGTCTTGATT TTGCCAGCAT CTTTGAACTC
GACCTGGCAC TCCGTGTCCT TGATTCGCCT GATGTACGCG TCGAACTGTG TGAGATCCGT
GGAGGAGCCC GACTTTCCTC CGGGACCGTC ATCGCGACCG TGGGAGAAGA GTTTGAACTG
TTCTTCCGGT TGGCGGGAGG TACGGATTCT CGCGTCTCAG TCGAACTATA CCACCCCAGC
CGGGAAGCCA GTGTCGAACC CTGCGCACTG AAGGAGCGAT TTGATGTGGT TAGACGAATC
GCCATCGCGA CGTCCACTCG CACCGATGAA ACACCTTCAC AGTCTGAGGT CTGGCTCGCC
GATTTGCCTG GTGCAGAAAT TCAACGAGTC TTCCGGCACC TGGCCCAACA TGGCACAGTG
ACGGAAACCG AAGTCGCCGA GATGCTCGGC AGCACCCGGG AGTTCCGAAA ATTCTCCCGC
CAGTTTGAAC AACACGCGGC AAGAGCGCCA TTCACAATCC GGATTGACAG TGTTTCAGGA
GTGAAACGAT ATGTCCGGGA AGGAGCGACC TTATGA
|
|---|
| Protein sequence | MSDLFGPVSR LLEAEVRDWV TKHNLVFWLD TGSHYVDLVN QLRALRKQGE LKYDIYTFNG
SFLEMLFELE EVMGGVDATR AVIHLPGFNE ELVKATPLLE LYKAGARYRK ALETLVRDAA
AGKVRPDQID EFLQRGNLSL AGADMWLHDL QSTGAEGLAS QLRNVSLNEL VDDLLLNRSL
AQRIATIDLR AGTISDGDPR AIRDRIVSLT GMPESWFDVS LQNSFSSGAE PTSVEAVAYA
ICSWAACVSY VHDLLVPPLS PLLEPVPRLP QLVRDTCHEL VVHLQNGNER QRSFYRQMAL
ETELRLTDDV GQIAATDLGR FDTFYFEEET ILKASLQALQ DRRWDAAQDW ASRRSDPNSF
WLVDDALRRN VWQLVAGAAR LGVAIQTAGP ALKATDSVAN AAQEYVQLGA KVDQAQRHLE
QDRQKLLRSQ MPEFEQVRSV LDQMQIVWRD WANSWGQGFN AVCKTHGFLP DSSLQQRTLF
DETVKPLTAG DGITAYFVVD ALRYEMGQEL LESIGDTAKT DVKLDWRLAE LPTVTEVGMN
VLAPVAKGSK LQPEISNGRI AGFSTGEFRV HDPDTRRRAV HDRAGGRTCP RIELEEVLRL
EAITLRRKIA GARLVMVHSR EIDNSGEAGF GPSVFETVLK DLRSAWHLLR EAGVRHFVFT
ADHGFLLVDE NSHTAQSYGR KIDPHRRYVI ADRAANHSGE VRVALRDLGY DCDDLHLMFP
ESVAVFDTGK QRKGFAHGGN SFQERVIPVL KISHRVAVGG NSTVYNLSAA RKPAVAGMHC
LAVRVAHASG SLDFASIFEL DLALRVLDSP DVRVELCEIR GGARLSSGTV IATVGEEFEL
FFRLAGGTDS RVSVELYHPS REASVEPCAL KERFDVVRRI AIATSTRTDE TPSQSEVWLA
DLPGAEIQRV FRHLAQHGTV TETEVAEMLG STREFRKFSR QFEQHAARAP FTIRIDSVSG
VKRYVREGAT L
|
|---|
| |