Gene Plim_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3028 
Symbol 
ID9139740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3924175 
End bp3925497 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content55% 
IMG OID 
ProductPhosphodiesterase/alkaline phosphatase D-like protein 
Protein accessionYP_003631049 
Protein GI296123271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATG CAACAATTTC AGCCGGGTGG AATCGCCGAG AGTTTATGAC CGCTGCGGGC 
ACTTTGGTTG TGGCCACAGG CGTCAATCCT TTGCTGGCTG CCGATCAGCC CATTCGCGAA
GTCATCGGGC CTGTGTTGGG GCATATTGAT CATCGTCAAG CCTACTTATT CTGCCGCGCT
CCTGGTGCGA CATCCGTTCG CCTGAGCCTC GAGAATGCAC AAGGGCAGAG AATACAGCAA
TTGGAATCGG CTCCCGAGAA AGTTCACGAT GATTGTGTGA CCTTCTCTCT GCAGAACCTC
CAGCCCGGTA CGACCTATCG CGGCCAGTTG GTGACCACGG GTTCAACCTC ACTGTTCGGT
CCTGATAACT TTGATGGAAA GTTCACCTTC ACGACACCCG TAGCACCCGA AACGCCTGCC
ACAATCACGC TGGGGCTGGG TTCCTGTGTG TCGAGCACCG AGTTCGATGA TTTATGGAGC
CAGATCGCCG CTCATCAAGT TGATGGCTTC TGCCTGTTGG GCGATACCCC TTACATCGAT
ACCAACGACC TCAGCAGGAA CCGACTCGCC CGGCGAAAGT TCTGGGGGAC ACTCCCCACC
CTCAGAATGC TCGCTACGAA AATCCCCTTC TGGAACACCT GGGATGACCA CGACTTCGGC
AAGAATGATT CCGATGGACT GATGCCGAAA AAGGAAGATA TCCGCCAGGC GTTCCTCGAA
TACAACGCTC TGGCAAATTA CGGAGAAAAC GACGAGGGGA TCTATACCTC GTTTCGCCGA
GGGCCTGTCG AAGTCTGGCT GATTGATGAT CGCTGGTTCT CACAGACAGC CAGTTCCTGG
GCCGACCCGG CACAAAAGAC CTGCCTGGGC CAAGCGCAGT GGAATTGGCT TCAGCGAACA
TTGAAGGCTT CGACGGCCCC ATTCAAAATT CTTTGTACCG GCATGGTCTG GTATCCCAAG
GGGAACAAAG AGAAAGATCA CTGGGAGACC TACAGTGCCG AGCGCGAAGC ACTCTTTGCC
TGGATTAAGC AGCAGCAGAT CAGCGGCGTC ATGCTAATCT CGGGAGATAT CCATGTCAGC
CGGCATCATA TTTATGGGCC GGAGCGAGTC GGTTATCCAC TCCACGAATG TGTTGTTTCG
CCGATGCACG CTTCGGTCAT CCCTTCGCTC GATGTGCAGC ATCCAGCCCG TGTCTGGAGC
AAACCCGCTC CGAATGTGTT CCTCAAGCTC GTTGCCAGCA ATCTGGAAAG CCAACCCAAA
CTGACTGCCA CCTGGATCAA CAGGCAGGGC GAAGAACTCC ACTCTTTTGA ATGGATTGCC
TGA
 
Protein sequence
MTNATISAGW NRREFMTAAG TLVVATGVNP LLAADQPIRE VIGPVLGHID HRQAYLFCRA 
PGATSVRLSL ENAQGQRIQQ LESAPEKVHD DCVTFSLQNL QPGTTYRGQL VTTGSTSLFG
PDNFDGKFTF TTPVAPETPA TITLGLGSCV SSTEFDDLWS QIAAHQVDGF CLLGDTPYID
TNDLSRNRLA RRKFWGTLPT LRMLATKIPF WNTWDDHDFG KNDSDGLMPK KEDIRQAFLE
YNALANYGEN DEGIYTSFRR GPVEVWLIDD RWFSQTASSW ADPAQKTCLG QAQWNWLQRT
LKASTAPFKI LCTGMVWYPK GNKEKDHWET YSAEREALFA WIKQQQISGV MLISGDIHVS
RHHIYGPERV GYPLHECVVS PMHASVIPSL DVQHPARVWS KPAPNVFLKL VASNLESQPK
LTATWINRQG EELHSFEWIA