Gene Plim_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3023 
Symbol 
ID9139735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3917067 
End bp3918566 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content43% 
IMG OID 
Productheat shock protein DnaJ domain protein 
Protein accessionYP_003631044 
Protein GI296123266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.197808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTACCG ATGCTCACTC GCTCCCTGAT GATTTCTCGA AGTGGCCAGA AAATCCCTGG 
GAGTTAATGG GGATGGGACG ATCATTTTCA AGTGGTGATC TAAAGCGGGT CTATTCAAAG
CTGATTAAGC GGTTTCGGCC TGAAATCGAC GCTGAGGCCT TTCAGAAGAT TCGGAAGGCG
TATGAGGTAC TTCTTCCCTA TGCTGATGCG AAAAAACGAT CAGACGATTT TGCTCTTCTT
CTCGGCGAGC AAATGCAGAC TCCTGATATG ATTCGTCCAT TTAAAGATGA AGTTATCCTT
GAGTGTGATT CAAAAGATGC TTTTAGAGGT ATGGAAGCTT CTGTCAAGGA CGCAGATCAT
TCATATCTGT CATGTCTTGA TAGTGATCCG TGGCAATTGG CGAAATCCGG GAAAGTCGAT
CTTGCTTACG AAGTTCTTTC GCGAAGAAGT CTGACTCATC CTCATATTGA GCGGGAGATG
CTGCAAAGAT ACTGGTTGCT GACGCTTCAG CCGCATTTAG ATTCATCGAC GACATCTCTG
AATCTGCTGT TGAGTTATGC ATTGAAGTAT GGCTTGAGCT TACAGTCTCA ACGGCTGTTG
ACGAGGGAGT GTTCGAATCA CCCCGAATTA ACCACAGGAA GAGATTTTTG GAAGCTGATA
TTGGATCCTG CGTTTCGTAC ACTTCAAACA CAGCTTCTGC GAGTGCGATG GCAGTTGTAT
TTTAAGAGGG ATCAAGACGA AATAGTTATT CAAGAGTTTC ATCGACTTGA TGAAATGCTT
GTGGATGACT GTTCTTATTG GTTAGCTATC ATTGTCTGTT TATTGGAGAT GTTGATTGTT
TATGAACCAG TTCAGAAAGA CGAGCTTATT CAACACTGTA AAAGTGCTCT GAGTGAGTTT
ACTGTTAGTG GGTTTTATGG TGATCATCTT TTGGATCGTG CAGATTGTCT TCTTATAAGC
TCTGAGCAAC TGAGTTTCAC GAACCCATCT ATCGTGAAGG CATCACAATC CGTTCGATCT
CTATGCCGAA TGTGCCTTAA AGTCGCTTTT GAAATGGAAT ACGAGAATGA GACGCTCCAG
AATGAAATGG TTGACGAACT TCTATTACAG TTATTGATTA ATCCGCAGGA TACGCTTCTA
TGTCTGGAAA TATTGCGGGA TAAGGGGACT ATTTGGTTTC AGGCGATAAA AGTCAAAATT
GAACAACTGT GGTTAAGTAA GTGTGGTCAT TACATTGCTC TGGATGGTGA TGAGATCCGT
CGCCATCTCA TTCGTGACCC AGTGCTTCGT TCTGGACTGA AATCGTGGCA TTTTTATTAT
CAGTCACTTC GTTTTCGATT ACTGAGATTC TGCCTGTACC AACAGTTAGA GTATTTCCAG
GTTCTTAATG TTCTCAAGGA TTGTGTTCCA ATTGATTCAG AGGTTATAGA ACGGATAGAT
AAACTTTCAG CGGACGACCC TCTGTTGTGT CTGCTTAGGA TCTGCCAGAT CTATCGATAA
 
Protein sequence
MGTDAHSLPD DFSKWPENPW ELMGMGRSFS SGDLKRVYSK LIKRFRPEID AEAFQKIRKA 
YEVLLPYADA KKRSDDFALL LGEQMQTPDM IRPFKDEVIL ECDSKDAFRG MEASVKDADH
SYLSCLDSDP WQLAKSGKVD LAYEVLSRRS LTHPHIEREM LQRYWLLTLQ PHLDSSTTSL
NLLLSYALKY GLSLQSQRLL TRECSNHPEL TTGRDFWKLI LDPAFRTLQT QLLRVRWQLY
FKRDQDEIVI QEFHRLDEML VDDCSYWLAI IVCLLEMLIV YEPVQKDELI QHCKSALSEF
TVSGFYGDHL LDRADCLLIS SEQLSFTNPS IVKASQSVRS LCRMCLKVAF EMEYENETLQ
NEMVDELLLQ LLINPQDTLL CLEILRDKGT IWFQAIKVKI EQLWLSKCGH YIALDGDEIR
RHLIRDPVLR SGLKSWHFYY QSLRFRLLRF CLYQQLEYFQ VLNVLKDCVP IDSEVIERID
KLSADDPLLC LLRICQIYR