Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3023 |
Symbol | |
ID | 9139735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3917067 |
End bp | 3918566 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | heat shock protein DnaJ domain protein |
Protein accession | YP_003631044 |
Protein GI | 296123266 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.197808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTACCG ATGCTCACTC GCTCCCTGAT GATTTCTCGA AGTGGCCAGA AAATCCCTGG GAGTTAATGG GGATGGGACG ATCATTTTCA AGTGGTGATC TAAAGCGGGT CTATTCAAAG CTGATTAAGC GGTTTCGGCC TGAAATCGAC GCTGAGGCCT TTCAGAAGAT TCGGAAGGCG TATGAGGTAC TTCTTCCCTA TGCTGATGCG AAAAAACGAT CAGACGATTT TGCTCTTCTT CTCGGCGAGC AAATGCAGAC TCCTGATATG ATTCGTCCAT TTAAAGATGA AGTTATCCTT GAGTGTGATT CAAAAGATGC TTTTAGAGGT ATGGAAGCTT CTGTCAAGGA CGCAGATCAT TCATATCTGT CATGTCTTGA TAGTGATCCG TGGCAATTGG CGAAATCCGG GAAAGTCGAT CTTGCTTACG AAGTTCTTTC GCGAAGAAGT CTGACTCATC CTCATATTGA GCGGGAGATG CTGCAAAGAT ACTGGTTGCT GACGCTTCAG CCGCATTTAG ATTCATCGAC GACATCTCTG AATCTGCTGT TGAGTTATGC ATTGAAGTAT GGCTTGAGCT TACAGTCTCA ACGGCTGTTG ACGAGGGAGT GTTCGAATCA CCCCGAATTA ACCACAGGAA GAGATTTTTG GAAGCTGATA TTGGATCCTG CGTTTCGTAC ACTTCAAACA CAGCTTCTGC GAGTGCGATG GCAGTTGTAT TTTAAGAGGG ATCAAGACGA AATAGTTATT CAAGAGTTTC ATCGACTTGA TGAAATGCTT GTGGATGACT GTTCTTATTG GTTAGCTATC ATTGTCTGTT TATTGGAGAT GTTGATTGTT TATGAACCAG TTCAGAAAGA CGAGCTTATT CAACACTGTA AAAGTGCTCT GAGTGAGTTT ACTGTTAGTG GGTTTTATGG TGATCATCTT TTGGATCGTG CAGATTGTCT TCTTATAAGC TCTGAGCAAC TGAGTTTCAC GAACCCATCT ATCGTGAAGG CATCACAATC CGTTCGATCT CTATGCCGAA TGTGCCTTAA AGTCGCTTTT GAAATGGAAT ACGAGAATGA GACGCTCCAG AATGAAATGG TTGACGAACT TCTATTACAG TTATTGATTA ATCCGCAGGA TACGCTTCTA TGTCTGGAAA TATTGCGGGA TAAGGGGACT ATTTGGTTTC AGGCGATAAA AGTCAAAATT GAACAACTGT GGTTAAGTAA GTGTGGTCAT TACATTGCTC TGGATGGTGA TGAGATCCGT CGCCATCTCA TTCGTGACCC AGTGCTTCGT TCTGGACTGA AATCGTGGCA TTTTTATTAT CAGTCACTTC GTTTTCGATT ACTGAGATTC TGCCTGTACC AACAGTTAGA GTATTTCCAG GTTCTTAATG TTCTCAAGGA TTGTGTTCCA ATTGATTCAG AGGTTATAGA ACGGATAGAT AAACTTTCAG CGGACGACCC TCTGTTGTGT CTGCTTAGGA TCTGCCAGAT CTATCGATAA
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Protein sequence | MGTDAHSLPD DFSKWPENPW ELMGMGRSFS SGDLKRVYSK LIKRFRPEID AEAFQKIRKA YEVLLPYADA KKRSDDFALL LGEQMQTPDM IRPFKDEVIL ECDSKDAFRG MEASVKDADH SYLSCLDSDP WQLAKSGKVD LAYEVLSRRS LTHPHIEREM LQRYWLLTLQ PHLDSSTTSL NLLLSYALKY GLSLQSQRLL TRECSNHPEL TTGRDFWKLI LDPAFRTLQT QLLRVRWQLY FKRDQDEIVI QEFHRLDEML VDDCSYWLAI IVCLLEMLIV YEPVQKDELI QHCKSALSEF TVSGFYGDHL LDRADCLLIS SEQLSFTNPS IVKASQSVRS LCRMCLKVAF EMEYENETLQ NEMVDELLLQ LLINPQDTLL CLEILRDKGT IWFQAIKVKI EQLWLSKCGH YIALDGDEIR RHLIRDPVLR SGLKSWHFYY QSLRFRLLRF CLYQQLEYFQ VLNVLKDCVP IDSEVIERID KLSADDPLLC LLRICQIYR
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