Gene Plim_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3016 
Symbol 
ID9139728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3905663 
End bp3909220 
Gene Length3558 bp 
Protein Length1185 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631037 
Protein GI296123259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0872848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATTG CTTCACTCCA TCTGGAAAAT GTCGGCCCAT TCCGCAAGAC GACCTGGAAC 
CTCGATCCAT CCCGAGGTTT TCAATTGTTT ATCGGGCCCA ATGAGGCGGG CAAAAGTACC
GCACTCAGGG CCCTGGCTGA TGCTCTGTAC GGCTTTCCTC ATACCTTGCC GGATGGTGAG
TCCTTTCAAC CTTATCGGGA TCGTCGTGTT GGTCTCTCTT TGATCAGCGA TGATGGCCAG
CAGCTCCGTT TTCTCCGCCG CAAAGCAACC AAACAGGCCT TGCGTGGCCT GGATGACAAA
ACGGTGGTCG ACGAAGCCGA ATTGAGCCGG TGGCTGCAAC AGGTGGATCG TACCCGCTTT
GAACAGTTCT TCGGGCTTGA CCATGCCCGG CTGGTTCAAG GTGGTAACGA ACTGCTCAAC
TCGAAAGGAG ATATCGGGAC CATCCTCTTC GCAGGTTCTC AGCTACAAGG AGCACCGCAG
ATTCTTGAAG CGCTGTCCCA GGAGGCAGCC AGCCTGTTCG CCCCTCGAGC ACAGAATCCC
CCCATCAACA GCCAGATCCG CCAACATGCC GACCTGATTG CCAAAGTCAA TCAGTTGATG
GTCAAGCCAC AGGCCTGGCG CGACGTTCAA ACCGAGTTTG ATCAGGCAAG TACCACCAAA
GACAAGCTGC AGTCACAACT CAAAGAGCTG GAAAAACGAG TCAGCCATCT GGCGAGGCTC
AATGCCGCCT GTACTCCGGC CCGGCAACTT CGGCAGATCA GGCAGCAACT GAAAAGCTAT
GCCGACTTGC CCATGCTCGA TGAAGAATTT TTTGAAAAGG TGGAAACTGT TCGCCAGAAG
ATCTTCAGTG CTGCTCACGA GCAACGAGTC AAGCTCGACG AATTGCAGCA ATTGAAATCC
ACCCTCGATC AATTGCCTCC TGTCGAATCG ATCTGGCTGG AACACGAAAG CACCATTCGC
GAACTCGTCG AAACACGCGG ATCAATTCAA AAGGCCCGCA AAGACACTCC CAAAGTTCAA
AAAGAGCTGC TTCTGGCAAA AGCCAGACAA CAGACCATCC TCGATCAGTG GAAATGGGCT
CCTGCGGATC AATCCGCTTC GATCCCCAGG AGACTCCGTA GAGAGCTCGA AGCACTTCAG
GCCGAGTGGC TGGTACTCTC CGAACGCAAA AAAGCACTGA CAGATCGTGC ACAGGCCCTG
GCCAAAACCA CAGCCAGAAT TGCCAGCGAA CCAGTCGATC GTCGAGAGAC GTTGCGGCAA
GAGCTGGCGA AAACTCAAGC GACGCTGCAA ACAGCCGCTT CACTGCTCGA AGCCGATCAG
AAGATCAGAA CTCTCCGCAT CAGCCAGACG ACACTCGAAC GAAACGTCGC CCAGGCCTGG
CAGAAGCTTG AACCACAAAC GCTCATGAGC CAGTGGGCGG AAGCACACAC ACTTTCGGAA
CAGATCGCAC TGCTCTCGTC AACGAACATT CCCCCTCACG ACGTGATCGA ACAGTTCCGC
GAAGAAATCG ACACCTGGCA CCAACAGGTC CTCTCAGCGG TGGCCGCTCT CGAAAAAGCA
CGGCTCGAAC AGTCACACGC CATCGAAGAG CGGCAACGAC TGCGCACATT GATTCTGCAA
GCCACGCCCG AAGATCTGGC CGCCGCTCGA AGTGAACGTG ACCAGCTCTG GGCAAAGTTC
CAGCAACAAC TGGAAAGTGA ACCGCGACCA GACCATCAGC AGCTGATCGA ACAGGCTCAG
ATCGTGCAGC AATCCATACA GCAGGCCGAT CAACTGGCTG ATGCACTCTT CAAGCAGGCC
ACCAATGTCT ATCGCGATCA AGAGCTGGCC CTGCGAACGG AGCAACTCTC AACTTCCATC
CAGCAACTGC AAGAGCGACT CACCACCCAG AAAGATCTCG AAAGCCAGGC AGTTCATCGC
TGGGAAAACT TGTGGAGTTC AACAGGCATC TCGCCCCGAT CCCCTCGCGA AATGCTGGTC
TGGTCTCGCA TGGCACACGA GTTGATCGAA CTCGGCGAAA AGCTCGCGGC AATCAACGAC
GAACTCACCG CTCACGATCA ACAGTGCGAA ATCTTCTGCC ACCAGTTCGA CACTTCACAG
AGCATCGAGT CCGATGCTCC CGAACCTCAA CCTTTGCCCA CAATTCATGC ACGGCTCAAG
ATCGACGACC AGAACCTGCT GGAAAGAATT CGTGCTGCGG ACCTGCTCGA ACTCGACAGG
CAACGTCTGA ATGATGATCA GACAGCCTAT CAACACGATC TCGAAGCCTG GCAATCGACC
AGCCAGGAGT GGGAACTCCG GTGGAAAGCC GCCATCCTGG CCACTGGCTG GGAAGAGTCG
ACCACACCCG ATGAACTCGC GGAGTTGTTA GAACAGTTTC AACTTCTTGA GCAGACACAG
AACTCAATTC AAAAGCTCGA GGAGAGACTC TCGGGTATGG CCGAAGATGA ATCGACCTTT
CAGGAACAGA TCTTCGATTT TGTCCGCACG TCGATTCCCC TTGAAGCCGA GAACCTGATT
GCCAGCTTCC CGCCCGTTGA ACTTTCGCAA GCCATCGAGA CTCGACAAAA TTCCGCCCGC
GTGCAGCAGG CTCAATATCA ACAGCAGCAG GCCACTATCG AGCGTCTGAC TGCCGCTGTG
GAACAACTGG GTGATGCACT GGAACTTGCC CAGGAACAAC TGAACCAGGC TCTCAGGCAG
GCCAGGCTCA AAGAACCCTC CGAATTGACG GCACTGCGAG AGAAATGCCG CCTTCGTAGA
AAACTGATCG ATGATGCCGT TCACCACGAA CTCGAACTGG CCCGGCAATG CGGTACCAAT
TCGGTCGAAG AGCTGATTCA GCAGGCACTC GAAGTCGACC CAGCGACACT CCCTCCGGAA
ATTGAATCAC TCGGACAGGA AATCAGTTCC TTAAGAGAGC AATTGGGACA AGCGACGGCG
CGCCTGGAAG CCGCCCGCCT GGCATTGGCA GGCATGAGTG GAGAATCGAA AGCGGCGGAA
TTGAATGAAG AAGCCAGTGA TCTTCGCCGG CTGATTATAC AGGATAGCCG GGAGTATCTG
CGATTAGTGA CTGCCGCCGA GCTCTTGCGA TCCGCGATCA AAACCTATCG AGAGCAGCAT
CAGGGGCCGG TCTTTGCCCT GGCTGCGTCG ATCTTTACAC GCATGACGGG CGGTGTGTTT
GAAGGTTTGC AGATTGATTC CGAGGATGGT TCTCAAGAAC TGCTGGTGCG TTGTCACGAT
GGGCGCACGC TGCGAGTGAC TGAACTTTCG ACAGGCACCG CCGACCAGCT CTTTCTGGCC
ATCCGGCTGG CGTGGATTGA AGAGTACCTG CATCAGCACC CCCCCTTCCC GCTGGTGCTG
GATGATGTGC TGGTGCAGTT CGATGATGAG CGCACGCGTT ATGCCCTGGA GGTGCTGGGA
GAACTCTCTC GCCGCACTCA AATCCTGTGC TTCACGCATC ATGAACACCT CAAGGAACTG
GTCGAACAGA CGCTGGAACC CGACCAATAC GAGATCCACT CCCTCCAGCG CCTTCGCACA
CCTCCTTTCA AGAGCTGA
 
Protein sequence
MRIASLHLEN VGPFRKTTWN LDPSRGFQLF IGPNEAGKST ALRALADALY GFPHTLPDGE 
SFQPYRDRRV GLSLISDDGQ QLRFLRRKAT KQALRGLDDK TVVDEAELSR WLQQVDRTRF
EQFFGLDHAR LVQGGNELLN SKGDIGTILF AGSQLQGAPQ ILEALSQEAA SLFAPRAQNP
PINSQIRQHA DLIAKVNQLM VKPQAWRDVQ TEFDQASTTK DKLQSQLKEL EKRVSHLARL
NAACTPARQL RQIRQQLKSY ADLPMLDEEF FEKVETVRQK IFSAAHEQRV KLDELQQLKS
TLDQLPPVES IWLEHESTIR ELVETRGSIQ KARKDTPKVQ KELLLAKARQ QTILDQWKWA
PADQSASIPR RLRRELEALQ AEWLVLSERK KALTDRAQAL AKTTARIASE PVDRRETLRQ
ELAKTQATLQ TAASLLEADQ KIRTLRISQT TLERNVAQAW QKLEPQTLMS QWAEAHTLSE
QIALLSSTNI PPHDVIEQFR EEIDTWHQQV LSAVAALEKA RLEQSHAIEE RQRLRTLILQ
ATPEDLAAAR SERDQLWAKF QQQLESEPRP DHQQLIEQAQ IVQQSIQQAD QLADALFKQA
TNVYRDQELA LRTEQLSTSI QQLQERLTTQ KDLESQAVHR WENLWSSTGI SPRSPREMLV
WSRMAHELIE LGEKLAAIND ELTAHDQQCE IFCHQFDTSQ SIESDAPEPQ PLPTIHARLK
IDDQNLLERI RAADLLELDR QRLNDDQTAY QHDLEAWQST SQEWELRWKA AILATGWEES
TTPDELAELL EQFQLLEQTQ NSIQKLEERL SGMAEDESTF QEQIFDFVRT SIPLEAENLI
ASFPPVELSQ AIETRQNSAR VQQAQYQQQQ ATIERLTAAV EQLGDALELA QEQLNQALRQ
ARLKEPSELT ALREKCRLRR KLIDDAVHHE LELARQCGTN SVEELIQQAL EVDPATLPPE
IESLGQEISS LREQLGQATA RLEAARLALA GMSGESKAAE LNEEASDLRR LIIQDSREYL
RLVTAAELLR SAIKTYREQH QGPVFALAAS IFTRMTGGVF EGLQIDSEDG SQELLVRCHD
GRTLRVTELS TGTADQLFLA IRLAWIEEYL HQHPPFPLVL DDVLVQFDDE RTRYALEVLG
ELSRRTQILC FTHHEHLKEL VEQTLEPDQY EIHSLQRLRT PPFKS