Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3016 |
Symbol | |
ID | 9139728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3905663 |
End bp | 3909220 |
Gene Length | 3558 bp |
Protein Length | 1185 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003631037 |
Protein GI | 296123259 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0872848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGATTG CTTCACTCCA TCTGGAAAAT GTCGGCCCAT TCCGCAAGAC GACCTGGAAC CTCGATCCAT CCCGAGGTTT TCAATTGTTT ATCGGGCCCA ATGAGGCGGG CAAAAGTACC GCACTCAGGG CCCTGGCTGA TGCTCTGTAC GGCTTTCCTC ATACCTTGCC GGATGGTGAG TCCTTTCAAC CTTATCGGGA TCGTCGTGTT GGTCTCTCTT TGATCAGCGA TGATGGCCAG CAGCTCCGTT TTCTCCGCCG CAAAGCAACC AAACAGGCCT TGCGTGGCCT GGATGACAAA ACGGTGGTCG ACGAAGCCGA ATTGAGCCGG TGGCTGCAAC AGGTGGATCG TACCCGCTTT GAACAGTTCT TCGGGCTTGA CCATGCCCGG CTGGTTCAAG GTGGTAACGA ACTGCTCAAC TCGAAAGGAG ATATCGGGAC CATCCTCTTC GCAGGTTCTC AGCTACAAGG AGCACCGCAG ATTCTTGAAG CGCTGTCCCA GGAGGCAGCC AGCCTGTTCG CCCCTCGAGC ACAGAATCCC CCCATCAACA GCCAGATCCG CCAACATGCC GACCTGATTG CCAAAGTCAA TCAGTTGATG GTCAAGCCAC AGGCCTGGCG CGACGTTCAA ACCGAGTTTG ATCAGGCAAG TACCACCAAA GACAAGCTGC AGTCACAACT CAAAGAGCTG GAAAAACGAG TCAGCCATCT GGCGAGGCTC AATGCCGCCT GTACTCCGGC CCGGCAACTT CGGCAGATCA GGCAGCAACT GAAAAGCTAT GCCGACTTGC CCATGCTCGA TGAAGAATTT TTTGAAAAGG TGGAAACTGT TCGCCAGAAG ATCTTCAGTG CTGCTCACGA GCAACGAGTC AAGCTCGACG AATTGCAGCA ATTGAAATCC ACCCTCGATC AATTGCCTCC TGTCGAATCG ATCTGGCTGG AACACGAAAG CACCATTCGC GAACTCGTCG AAACACGCGG ATCAATTCAA AAGGCCCGCA AAGACACTCC CAAAGTTCAA AAAGAGCTGC TTCTGGCAAA AGCCAGACAA CAGACCATCC TCGATCAGTG GAAATGGGCT CCTGCGGATC AATCCGCTTC GATCCCCAGG AGACTCCGTA GAGAGCTCGA AGCACTTCAG GCCGAGTGGC TGGTACTCTC CGAACGCAAA AAAGCACTGA CAGATCGTGC ACAGGCCCTG GCCAAAACCA CAGCCAGAAT TGCCAGCGAA CCAGTCGATC GTCGAGAGAC GTTGCGGCAA GAGCTGGCGA AAACTCAAGC GACGCTGCAA ACAGCCGCTT CACTGCTCGA AGCCGATCAG AAGATCAGAA CTCTCCGCAT CAGCCAGACG ACACTCGAAC GAAACGTCGC CCAGGCCTGG CAGAAGCTTG AACCACAAAC GCTCATGAGC CAGTGGGCGG AAGCACACAC ACTTTCGGAA CAGATCGCAC TGCTCTCGTC AACGAACATT CCCCCTCACG ACGTGATCGA ACAGTTCCGC GAAGAAATCG ACACCTGGCA CCAACAGGTC CTCTCAGCGG TGGCCGCTCT CGAAAAAGCA CGGCTCGAAC AGTCACACGC CATCGAAGAG CGGCAACGAC TGCGCACATT GATTCTGCAA GCCACGCCCG AAGATCTGGC CGCCGCTCGA AGTGAACGTG ACCAGCTCTG GGCAAAGTTC CAGCAACAAC TGGAAAGTGA ACCGCGACCA GACCATCAGC AGCTGATCGA ACAGGCTCAG ATCGTGCAGC AATCCATACA GCAGGCCGAT CAACTGGCTG ATGCACTCTT CAAGCAGGCC ACCAATGTCT ATCGCGATCA AGAGCTGGCC CTGCGAACGG AGCAACTCTC AACTTCCATC CAGCAACTGC AAGAGCGACT CACCACCCAG AAAGATCTCG AAAGCCAGGC AGTTCATCGC TGGGAAAACT TGTGGAGTTC AACAGGCATC TCGCCCCGAT CCCCTCGCGA AATGCTGGTC TGGTCTCGCA TGGCACACGA GTTGATCGAA CTCGGCGAAA AGCTCGCGGC AATCAACGAC GAACTCACCG CTCACGATCA ACAGTGCGAA ATCTTCTGCC ACCAGTTCGA CACTTCACAG AGCATCGAGT CCGATGCTCC CGAACCTCAA CCTTTGCCCA CAATTCATGC ACGGCTCAAG ATCGACGACC AGAACCTGCT GGAAAGAATT CGTGCTGCGG ACCTGCTCGA ACTCGACAGG CAACGTCTGA ATGATGATCA GACAGCCTAT CAACACGATC TCGAAGCCTG GCAATCGACC AGCCAGGAGT GGGAACTCCG GTGGAAAGCC GCCATCCTGG CCACTGGCTG GGAAGAGTCG ACCACACCCG ATGAACTCGC GGAGTTGTTA GAACAGTTTC AACTTCTTGA GCAGACACAG AACTCAATTC AAAAGCTCGA GGAGAGACTC TCGGGTATGG CCGAAGATGA ATCGACCTTT CAGGAACAGA TCTTCGATTT TGTCCGCACG TCGATTCCCC TTGAAGCCGA GAACCTGATT GCCAGCTTCC CGCCCGTTGA ACTTTCGCAA GCCATCGAGA CTCGACAAAA TTCCGCCCGC GTGCAGCAGG CTCAATATCA ACAGCAGCAG GCCACTATCG AGCGTCTGAC TGCCGCTGTG GAACAACTGG GTGATGCACT GGAACTTGCC CAGGAACAAC TGAACCAGGC TCTCAGGCAG GCCAGGCTCA AAGAACCCTC CGAATTGACG GCACTGCGAG AGAAATGCCG CCTTCGTAGA AAACTGATCG ATGATGCCGT TCACCACGAA CTCGAACTGG CCCGGCAATG CGGTACCAAT TCGGTCGAAG AGCTGATTCA GCAGGCACTC GAAGTCGACC CAGCGACACT CCCTCCGGAA ATTGAATCAC TCGGACAGGA AATCAGTTCC TTAAGAGAGC AATTGGGACA AGCGACGGCG CGCCTGGAAG CCGCCCGCCT GGCATTGGCA GGCATGAGTG GAGAATCGAA AGCGGCGGAA TTGAATGAAG AAGCCAGTGA TCTTCGCCGG CTGATTATAC AGGATAGCCG GGAGTATCTG CGATTAGTGA CTGCCGCCGA GCTCTTGCGA TCCGCGATCA AAACCTATCG AGAGCAGCAT CAGGGGCCGG TCTTTGCCCT GGCTGCGTCG ATCTTTACAC GCATGACGGG CGGTGTGTTT GAAGGTTTGC AGATTGATTC CGAGGATGGT TCTCAAGAAC TGCTGGTGCG TTGTCACGAT GGGCGCACGC TGCGAGTGAC TGAACTTTCG ACAGGCACCG CCGACCAGCT CTTTCTGGCC ATCCGGCTGG CGTGGATTGA AGAGTACCTG CATCAGCACC CCCCCTTCCC GCTGGTGCTG GATGATGTGC TGGTGCAGTT CGATGATGAG CGCACGCGTT ATGCCCTGGA GGTGCTGGGA GAACTCTCTC GCCGCACTCA AATCCTGTGC TTCACGCATC ATGAACACCT CAAGGAACTG GTCGAACAGA CGCTGGAACC CGACCAATAC GAGATCCACT CCCTCCAGCG CCTTCGCACA CCTCCTTTCA AGAGCTGA
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Protein sequence | MRIASLHLEN VGPFRKTTWN LDPSRGFQLF IGPNEAGKST ALRALADALY GFPHTLPDGE SFQPYRDRRV GLSLISDDGQ QLRFLRRKAT KQALRGLDDK TVVDEAELSR WLQQVDRTRF EQFFGLDHAR LVQGGNELLN SKGDIGTILF AGSQLQGAPQ ILEALSQEAA SLFAPRAQNP PINSQIRQHA DLIAKVNQLM VKPQAWRDVQ TEFDQASTTK DKLQSQLKEL EKRVSHLARL NAACTPARQL RQIRQQLKSY ADLPMLDEEF FEKVETVRQK IFSAAHEQRV KLDELQQLKS TLDQLPPVES IWLEHESTIR ELVETRGSIQ KARKDTPKVQ KELLLAKARQ QTILDQWKWA PADQSASIPR RLRRELEALQ AEWLVLSERK KALTDRAQAL AKTTARIASE PVDRRETLRQ ELAKTQATLQ TAASLLEADQ KIRTLRISQT TLERNVAQAW QKLEPQTLMS QWAEAHTLSE QIALLSSTNI PPHDVIEQFR EEIDTWHQQV LSAVAALEKA RLEQSHAIEE RQRLRTLILQ ATPEDLAAAR SERDQLWAKF QQQLESEPRP DHQQLIEQAQ IVQQSIQQAD QLADALFKQA TNVYRDQELA LRTEQLSTSI QQLQERLTTQ KDLESQAVHR WENLWSSTGI SPRSPREMLV WSRMAHELIE LGEKLAAIND ELTAHDQQCE IFCHQFDTSQ SIESDAPEPQ PLPTIHARLK IDDQNLLERI RAADLLELDR QRLNDDQTAY QHDLEAWQST SQEWELRWKA AILATGWEES TTPDELAELL EQFQLLEQTQ NSIQKLEERL SGMAEDESTF QEQIFDFVRT SIPLEAENLI ASFPPVELSQ AIETRQNSAR VQQAQYQQQQ ATIERLTAAV EQLGDALELA QEQLNQALRQ ARLKEPSELT ALREKCRLRR KLIDDAVHHE LELARQCGTN SVEELIQQAL EVDPATLPPE IESLGQEISS LREQLGQATA RLEAARLALA GMSGESKAAE LNEEASDLRR LIIQDSREYL RLVTAAELLR SAIKTYREQH QGPVFALAAS IFTRMTGGVF EGLQIDSEDG SQELLVRCHD GRTLRVTELS TGTADQLFLA IRLAWIEEYL HQHPPFPLVL DDVLVQFDDE RTRYALEVLG ELSRRTQILC FTHHEHLKEL VEQTLEPDQY EIHSLQRLRT PPFKS
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