Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2990 |
Symbol | |
ID | 9139702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3873018 |
End bp | 3874124 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | protein of unknown function DUF444 |
Protein accession | YP_003631011 |
Protein GI | 296123233 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCGAC CGATCGATCT TGATACCCAG CGGTTCAAAG AAATCGTCCG CGGGAAAGTG CGCGACGGAC TAAAGAAGTA CATCACTCAG GGAGAAATTC TGGGACGCCA GGGCCGGGAG GTGGTGAGTA TTCCGATTCC AAATCTGGAT ATTCCCCGCT TTCGTCACGG CAGCAAAGGT TCTGGAGGAG TGGGCCAAGG CGAAGGAGAG GCCGGGCAGC CTGTCGGTCA GGGAGGAGAC CAGGAAGGTG GCCTGGCCCA ACCCGGCGAT CAGGAAGGCC AGCACATCCG CGAAGCCGAA CTGACTCTCG ATGAACTGGC TGACATGTTG GGAAGTGAGC TGGAATTGCC ACTGATCACC CCCAAAGGAG ACAGCACACT TAAGACCAAA AAGCTGCGAT ACAACAGTAT CCGCCAGACA GGTCCCAAAT CGCTGCGTCA TTTCAAGCGC ACCTATAAGC GGGCTCTGCG GCGGCTCATT GCGACGGGAG GCTACGATCC TCTAACTCCC GTCGTTATCC CAACACATGA AGATGAACGC TTCCGCTCCT CCTCAGAAGT GGTGTTGCCG CATGCGAACG CCGCCGTCAT TTACATGATG GATGTCTCCG GCTCAATGAC CGACGACCAG AAGCAGATAG TCCGTACAGA GTCCTTCTGG ATTGATACCT GGCTGCGCAG TCAGTACGAC GGCCTTCAGC GTCGGTATAT CGTGCACGAT GCCGTCGCCC ATGAAGTGGA TGAAGACACC TTCTATCGCA CACGTGAAAG TGGGGGCACG AGAATTTCCT CAGCCTATAC GATGGCTCAG AAAATCATCG ATCGCGATTT TCCTCCCGCC GACTGGAACA TTTACTGCTT CCAATTCAGC GATGGCGACA ACTGGGGCGA GGACAACACG CTCTGCATGC AGAAACTGCA GAATGATCTG ATCCCCGTCT GTAATCTCTT CTGCTATGGT CAGGTCGAAA GCCCCTATGG CACGGGAGAT TACCTGCGTG AACTGAAGAA GATTGTCTCC CGGTTTGAAA ATCTGATTCT CTCAGAGATC AAGAACCGCG AGGGAATCTA CGATTCGATC AAAACGTTTC TCGGGAAGGG AAAATAG
|
Protein sequence | MTRPIDLDTQ RFKEIVRGKV RDGLKKYITQ GEILGRQGRE VVSIPIPNLD IPRFRHGSKG SGGVGQGEGE AGQPVGQGGD QEGGLAQPGD QEGQHIREAE LTLDELADML GSELELPLIT PKGDSTLKTK KLRYNSIRQT GPKSLRHFKR TYKRALRRLI ATGGYDPLTP VVIPTHEDER FRSSSEVVLP HANAAVIYMM DVSGSMTDDQ KQIVRTESFW IDTWLRSQYD GLQRRYIVHD AVAHEVDEDT FYRTRESGGT RISSAYTMAQ KIIDRDFPPA DWNIYCFQFS DGDNWGEDNT LCMQKLQNDL IPVCNLFCYG QVESPYGTGD YLRELKKIVS RFENLILSEI KNREGIYDSI KTFLGKGK
|
| |