Gene Plim_2989 details

Gene Information

• Locus tag: Plim_2989
• ID: 9139701
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 3870862
• End bp: 3872907
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 50%
• Product: PrkA AAA domain protein
• Protein accession: YP_003631010
• Protein GI: 296123232

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACAG GACAAGATCT GCTGGAAAAG TTCTCTGCCC GCCAGAATGC CGATACCTTC 
TGGCAGGAAC ACTGGCAGGG GACATTCGCC GAATATCTGG ATATCGTTCG CGAAAATCCC 
GGTGTCGTGC GGACGGCTCA TCAGCGGATG TACGACATGA TCACTTCCTA TGGTGATTAT 
TCTGTCGATG AAGGCCGCCG GGGTGGCCTG AAACGCTATG CATTTTTTGA TGATCCCGAC 
AACGGGGGGC GCGATGCGAT TTTCGGCCTC ACCGAAGAAC TGGCACAACT CGTCTCTGTC 
TTTCGCAGTG CGGCTCTCAA ATACGGCAGC GAACGCCGGG TCTTGCTATT GCACGGCCCA 
GTGGGGAGTT CGAAATCGAC CATTGCCCGA CTGCTGAAAA AAGGGATTGA GCGCTATTCC 
CTCCAACCCG AAGGAGCACT CTACACTTTT GGATGGAAGG AAAAGGATGG CAGCATTACC 
TGGGATCCGA TGAATGGCGA CCCCTTGCAA TTGATCCCCC ATGCTTATCG CCAGGAATTG 
TGCGATCAAC TGAATGAGGA AGTTCAGAAC GCGACTTATC CCATCGAGAT CAAAGGGGAT 
GTCTGCCCTC TTTCTCGATT CTACTTCCGT GAGCGTCTCG CTGAAGAAAA TGGTGACTGG 
ACGAAAGTTC TGGAATCGAT TGTCGTCAGG CGATTCTTTC TATCAGAAGC CGATCGGATC 
GGGATTGGTA CTTTCCAGCC CAAAGACGAG AAAAATCAGG ACTCAACAGA GCTGACTGGC 
GACATTAACT ATCGCAAAAT CGCCGAGTAT GGCAGTGAAT CTGACCCGCG CGCGTTCAAC 
TTTGATGGTG AGTTTAACGT CGCCAATCGC GGGATGATCG AATTTATCGA AGTCCTCAAA 
CTCGATGTCG CCTTCCTTTA CGATCTGCTG GGGGCCTCAC AAGAACATAA AATTAAGCCC 
AAGAAGTTTG CCCAGACCGA TATTGATACG GTGATTATTG GCCATACAAA CGAACCGGAA 
TATCGCAAGC TGCAGTCCAA CGAATTCATG GAAGCGCTCC GTGATCGTAC GGTCAAGATT 
GATATTCCCT ACGTCACCAA GTTGAGCCAG GAACTTTCGA TCTACGAAAA GGACTACAAC 
AGCCGACGCG TCCGCGGGAA GCACATTGCT CCTCATACTC TCGAAGTGGC AGCACTCTGG 
GCCGTTCTTA CCCGACTGGA AGAACCCAAG CATCACGGGT TGACACTGCT CCAGAAACTG 
AAGCTCTATA ACGGAAAATC GTTGCCGGGC TTCACGATGG ATAACGTGGA TCAGTTGCGT 
AAAGAAGCAA AGCATGAAGG AATGCAAGGG ATCTCACCGC GCTACGTGCA GGATAAGATT 
TCGAATGCAC TGGTGAATAA TGCCGATGCG ACAAGTATTA ACCCATTCAT GATGCTTAAC 
GAACTGGAGG GTGGGCTCAA GCATCACTCG CTCATTCCGA ATGAAGATAC CCGCGATGCT 
TACCGACGGC TGATTTCTAT TGTCAAGGAA GAATACACCG ACGTGGTGAA GAATGAAGTC 
CAAAGGGCCA TTGCTGCTGA CGACGAGGCT CTCACACGAC TCTGCGGCAA CTATATCGAT 
AATGTGAAGG CCTATACTCA GCGTGAACGG GTTCGCAATA AGTTTACCGG CCAGGATGAG 
CAACCGGATG AACGCCTGAT GCGGTCGATT GAAGAGCGCA TTGATATCCC GGAAACACGT 
AAGGACGACT TCCGCCGGGA AATCATGAAC TATATTGGAG CTCTAGCGCT CGATGGGAAA 
AAGTTTGACT ATAAGACCAA CGAACGCTTG CACAAAGCTC TGGAAATGAA GCTCTTTGAA 
GACCAGAAGG ACACCATCAA ACTCACCAGC CTGGTTTCCA ATGTGGTCGA TAAAGATACT 
CAGGAAAAGA TCGATATCGT CAAGGGCCGA CTGATTCGTG ATTTTGGCTA TAACGATGAA 
TCAGCCCATG ACGTGTTGCA ATATGTCGCA AGCATCTTCG CCCGCGGCGA TGCCAAACGT 
GATTAA 

 

Protein sequence

MTTGQDLLEK FSARQNADTF WQEHWQGTFA EYLDIVRENP GVVRTAHQRM YDMITSYGDY 
SVDEGRRGGL KRYAFFDDPD NGGRDAIFGL TEELAQLVSV FRSAALKYGS ERRVLLLHGP 
VGSSKSTIAR LLKKGIERYS LQPEGALYTF GWKEKDGSIT WDPMNGDPLQ LIPHAYRQEL 
CDQLNEEVQN ATYPIEIKGD VCPLSRFYFR ERLAEENGDW TKVLESIVVR RFFLSEADRI 
GIGTFQPKDE KNQDSTELTG DINYRKIAEY GSESDPRAFN FDGEFNVANR GMIEFIEVLK 
LDVAFLYDLL GASQEHKIKP KKFAQTDIDT VIIGHTNEPE YRKLQSNEFM EALRDRTVKI 
DIPYVTKLSQ ELSIYEKDYN SRRVRGKHIA PHTLEVAALW AVLTRLEEPK HHGLTLLQKL 
KLYNGKSLPG FTMDNVDQLR KEAKHEGMQG ISPRYVQDKI SNALVNNADA TSINPFMMLN 
ELEGGLKHHS LIPNEDTRDA YRRLISIVKE EYTDVVKNEV QRAIAADDEA LTRLCGNYID 
NVKAYTQRER VRNKFTGQDE QPDERLMRSI EERIDIPETR KDDFRREIMN YIGALALDGK 
KFDYKTNERL HKALEMKLFE DQKDTIKLTS LVSNVVDKDT QEKIDIVKGR LIRDFGYNDE 
SAHDVLQYVA SIFARGDAKR D