Gene Plim_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2962 
Symbol 
ID9139674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3834017 
End bp3835138 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content58% 
IMG OID 
Product2-methylcitrate synthase 
Protein accessionYP_003630983 
Protein GI296123205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCGC GACCACCACA GCTTTCTCCA GGCGAATTCG TCGTGGGCGA TACCTCGATC 
ACGGTAAAAC AACCGTCATT GCAGTACCGT GGTTACCGTG TTGAAGATCT GTCGCGCGAT
GCTCAATTTC CTGAGGTGGC CTGGCTGCTC ATCGAAGGTT CTTTGCCCAG CCCGGAAGAA
TTGGCCGATC TCGAAGCCGC ACTTTCTGAA GACGGCCGCC TGGATGACGA AGTCACCACC
TGGCTGGTCA ATCTTCCCAT GCATGTTCCC GGTCTTGATG CCTTAAGAAC AGCCGTCAGC
CTCACGGCTA CGCTCGACCC CCAGGCTCAG GATAACTCAC TGGCTGCTCA ACGCGAAAAA
GCCTATCGGC TCCTCGCACG CTACCCGATT ATGGCTGCCG CTGTGGCTGG GGGTACGTTA
CCGGACGACG CCGAATACCA CTCAGAACTC TCCTATGGTG GAAATTTCCT CCGCCTCGCC
TCAGGCATTG AGCCACGCGA TGAACATTCC ATGGCGATGG ATGCACTGCT GATCACTTCC
GCCGATTTCG AATACGAACC CAGTACTCTG GCAGCACGCC TGGCGGCTGG CAGTCGCGTC
GATGTTCTGG GAGCCATGGT GGCCGCCTTG AGCATCTTCT CAGGTGAATG CCCACTCGAT
GAAGCCCGCG CGATTGCCGA TCTGCTGGAT GCAGTTCATA GCCCGGAAAT GAGCCGCGAT
CTGATTCACA GGCTCTGGGA AGAACGAGCC ATTCTTCCCG GCTTCGGGCC CCGCATTCCC
CGCGGAGGCG ATGCCCGTGT CTGTGTTCTT AGCGATTGGG CCGATCAGCT CTCCGATCAG
CCCGATTTTG AGGTCTGGGA GGAGCATGCC GACTGGATCG AAGCCGCCGC CTGGGAAGTT
GCCGAACAAG GGCCCACACT TCTTTGGGCC GTCGTCAGAA TGATGAAGTA TCTTGGATTA
CCAGTGGATG CTGCTCCCGT CGTGATTTCC ACAGGGCGCG TCGCCGGTTG GATGGCTCAT
TACATGGAAC AGATCCGCAC CACCTGGAAG CTGAGACCGC TGGGAGCCTA CATCGGGCCA
ACCGATTTGC AGTTTTTACC CGTTGATGAC CGCAGTGCAT AA
 
Protein sequence
MASRPPQLSP GEFVVGDTSI TVKQPSLQYR GYRVEDLSRD AQFPEVAWLL IEGSLPSPEE 
LADLEAALSE DGRLDDEVTT WLVNLPMHVP GLDALRTAVS LTATLDPQAQ DNSLAAQREK
AYRLLARYPI MAAAVAGGTL PDDAEYHSEL SYGGNFLRLA SGIEPRDEHS MAMDALLITS
ADFEYEPSTL AARLAAGSRV DVLGAMVAAL SIFSGECPLD EARAIADLLD AVHSPEMSRD
LIHRLWEERA ILPGFGPRIP RGGDARVCVL SDWADQLSDQ PDFEVWEEHA DWIEAAAWEV
AEQGPTLLWA VVRMMKYLGL PVDAAPVVIS TGRVAGWMAH YMEQIRTTWK LRPLGAYIGP
TDLQFLPVDD RSA