Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2962 |
Symbol | |
ID | 9139674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3834017 |
End bp | 3835138 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | 2-methylcitrate synthase |
Protein accession | YP_003630983 |
Protein GI | 296123205 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCGC GACCACCACA GCTTTCTCCA GGCGAATTCG TCGTGGGCGA TACCTCGATC ACGGTAAAAC AACCGTCATT GCAGTACCGT GGTTACCGTG TTGAAGATCT GTCGCGCGAT GCTCAATTTC CTGAGGTGGC CTGGCTGCTC ATCGAAGGTT CTTTGCCCAG CCCGGAAGAA TTGGCCGATC TCGAAGCCGC ACTTTCTGAA GACGGCCGCC TGGATGACGA AGTCACCACC TGGCTGGTCA ATCTTCCCAT GCATGTTCCC GGTCTTGATG CCTTAAGAAC AGCCGTCAGC CTCACGGCTA CGCTCGACCC CCAGGCTCAG GATAACTCAC TGGCTGCTCA ACGCGAAAAA GCCTATCGGC TCCTCGCACG CTACCCGATT ATGGCTGCCG CTGTGGCTGG GGGTACGTTA CCGGACGACG CCGAATACCA CTCAGAACTC TCCTATGGTG GAAATTTCCT CCGCCTCGCC TCAGGCATTG AGCCACGCGA TGAACATTCC ATGGCGATGG ATGCACTGCT GATCACTTCC GCCGATTTCG AATACGAACC CAGTACTCTG GCAGCACGCC TGGCGGCTGG CAGTCGCGTC GATGTTCTGG GAGCCATGGT GGCCGCCTTG AGCATCTTCT CAGGTGAATG CCCACTCGAT GAAGCCCGCG CGATTGCCGA TCTGCTGGAT GCAGTTCATA GCCCGGAAAT GAGCCGCGAT CTGATTCACA GGCTCTGGGA AGAACGAGCC ATTCTTCCCG GCTTCGGGCC CCGCATTCCC CGCGGAGGCG ATGCCCGTGT CTGTGTTCTT AGCGATTGGG CCGATCAGCT CTCCGATCAG CCCGATTTTG AGGTCTGGGA GGAGCATGCC GACTGGATCG AAGCCGCCGC CTGGGAAGTT GCCGAACAAG GGCCCACACT TCTTTGGGCC GTCGTCAGAA TGATGAAGTA TCTTGGATTA CCAGTGGATG CTGCTCCCGT CGTGATTTCC ACAGGGCGCG TCGCCGGTTG GATGGCTCAT TACATGGAAC AGATCCGCAC CACCTGGAAG CTGAGACCGC TGGGAGCCTA CATCGGGCCA ACCGATTTGC AGTTTTTACC CGTTGATGAC CGCAGTGCAT AA
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Protein sequence | MASRPPQLSP GEFVVGDTSI TVKQPSLQYR GYRVEDLSRD AQFPEVAWLL IEGSLPSPEE LADLEAALSE DGRLDDEVTT WLVNLPMHVP GLDALRTAVS LTATLDPQAQ DNSLAAQREK AYRLLARYPI MAAAVAGGTL PDDAEYHSEL SYGGNFLRLA SGIEPRDEHS MAMDALLITS ADFEYEPSTL AARLAAGSRV DVLGAMVAAL SIFSGECPLD EARAIADLLD AVHSPEMSRD LIHRLWEERA ILPGFGPRIP RGGDARVCVL SDWADQLSDQ PDFEVWEEHA DWIEAAAWEV AEQGPTLLWA VVRMMKYLGL PVDAAPVVIS TGRVAGWMAH YMEQIRTTWK LRPLGAYIGP TDLQFLPVDD RSA
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