| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2941 |
|---|
| Symbol | |
|---|
| ID | 9139653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3803823 |
|---|
| End bp | 3805013 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Pyrrolo-quinoline quinone |
|---|
| Protein accession | YP_003630962 |
|---|
| Protein GI | 296123184 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.324041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCATTT TCCGCCTGAT GACGACGTTG GTATTAAGTA TCGCTGGCCT GTTGATCACA
GGCTTGTCAA CCTCGTCTGC CAGCGAAGTT GCACCGATCT CCTCAGTCAC CAGCCCTGCC
GCCGAGTGGC CCAGCTTTCG GCAGAATCTC CTTCAGACAG GAGTGGCCAC GAGCACATTG
CCTGAAAAAC TCGAGTTAGT CTGGGAAGCT CAACTGGGTG ATCAGATTGA GGCCAGTTGT
GCGATTTCAG GCGGCAAGGT CTATGCACCC TGTTTATCGG GTCATATTGT CTGTCTCGAC
TTGAAGTCTG GTCAGAAAGA CTGGTCGTAT CAGTCGATTG ATGAGATTCC TGCAAACAGC
TTTGCCCCCG GTTTCAAAGC CCCCGTCACG ATTTCCAATG GCATGGTCTA TGCCGGCGAT
GAAGACGGGG TGATGCATGC GATTGATGCC GCGACTGGCA AAAGAAAATG GATCTACAAG
ACGGAAGGTG AGATCTATAG CGGGGCTGTT GTCGTCGAAG ATCGCCTGCT GTTCGGTTCT
TATGATAACG CCCTGCATTG CGTAAAAATC GCTGATGGTT CCGGACTCTG GAAATTCGGG
ACAGATGGCT ATGTTCATTG CACGCCGGGT ATTGTCGAAA ACTCAGCCTT CATTGCCGGT
TGCGACGAAC ACCTTCGCCG GATTGATCTG CAGACCGGTA AGGAACTGTC CGTTCTGCCG
CTCTCGACCT ATCTGATTGC TTCGCCCGCG ATTCGTGGTG ATCTGCTCTA TGTGGGGACT
TATGCGAATG AAGTCGTCGC GGTCAACTGG AGAGAGATGA AGATTGCCTG GCGTTACCGC
CCCAGTGACA AAGAGTTTCC TTTCCATTCG TCGGCAGCGC TGGGTGATAA AGTGCTGGTG
ATTGGCAGCC GGGATAAGCA GATTCATGGA ATAGAAATTG CAACAGGCAA AGGTTTATGG
ACAACTCCGA CGCGGGCCCG GGTTGACAGC AGTCCGGCGA TTGTGGACCA GCGAGTTTTT
GTTGGTTCCG ATGATGGGAA TCTTTATCAA CTGGCCATTG AGAGTGGTGA AGTGCAGTGG
AAGTTCAATC TCGGCAAGTC GATTCATGCC GGGCCGGTGG TTGGCGAAGG ATACCTCGTG
GTGGGCTCGA CATCGTCGGA TGGGCGACTC TGCTGCTTTG GGAAGAAGTA G
|
|---|
| Protein sequence | MCIFRLMTTL VLSIAGLLIT GLSTSSASEV APISSVTSPA AEWPSFRQNL LQTGVATSTL
PEKLELVWEA QLGDQIEASC AISGGKVYAP CLSGHIVCLD LKSGQKDWSY QSIDEIPANS
FAPGFKAPVT ISNGMVYAGD EDGVMHAIDA ATGKRKWIYK TEGEIYSGAV VVEDRLLFGS
YDNALHCVKI ADGSGLWKFG TDGYVHCTPG IVENSAFIAG CDEHLRRIDL QTGKELSVLP
LSTYLIASPA IRGDLLYVGT YANEVVAVNW REMKIAWRYR PSDKEFPFHS SAALGDKVLV
IGSRDKQIHG IEIATGKGLW TTPTRARVDS SPAIVDQRVF VGSDDGNLYQ LAIESGEVQW
KFNLGKSIHA GPVVGEGYLV VGSTSSDGRL CCFGKK
|
|---|
| |