Gene Plim_2932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2932 
Symbol 
ID9139644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3794628 
End bp3795827 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630953 
Protein GI296123175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCC TCAATTCGTT TCGCTATCGC TCTATGGCAT TACTGACGTT GTGTTGGAGT 
GGATTTTTTG CAGCGGCAGC CAGCGGGCAA ACGAACCCGG AGCCGACTTC CAATGCACCA
GCAGCAGTTC CCTCGATTGA GCAGAAGCCG GTCTATTTCG AGCAGGATGT GACAGCTTCG
AATCCACTGA GAAATGCCCA GGCAGCCGAG CTCGAACGCT ACATCGCTTA CCTGAAATCC
GACACATCCC GGCTGCATCA GATTCTCCAG CCAGATTATA CCTCAATCGA GAAGTATCAG
GCTTCGGTCG AACCTTACCG CCGCGCCTTT GCTCAATCGA TTGGATATCC CCCGCCGGGT
GCAGTTCCTG CCGAGCCGGC TCAATTCGAG AAGATCGGTG AAGATGCGAT CGGCATCTAC
TACCGCGCTA CAATCCCCGT TCTGCCCGAG GTTCATGCGG AAGGAATCTA TATCACGCCC
AAGCATGTGA CAAAGCCGGC ACCACTGGTC ATCGCCATGC ACGGTGGAGG GGGCTCTCCA
GAAGTGGCAC TTTTCAAAGG AGGAGCCAAC TATCACGATA TGGTGCGTGG CGGTGTCAAA
CGCGGTTATG TGGTTTTTGC ACCGCAGCAT CTCTTTAAGG CGGATGCTTA TCCTGCCGAT
ATCCGCCGCC AGATCGACAA TCGGCTCAGG CATCAGGGAA CGAGCATTAC GGCTGTCGAG
ATCGCGAAAA TCACACGCAG CCTCGATGTT CTCTTGCAGC GTCCTGAAGT TGATCCGACG
CGAGTGGCGA TGGTCGGGCT GTCGTATGGA GGTTTCTATA CACTCGTCAC GACGGCACTT
GAGCCACGGA TTCATGTCGC AGCATCGAGT TGCTATTACG GCGTGCAGGA GAGCCGGTAT
CGAGAAAATG AGCTTTCCGT CCCGAGTGAT TTCTGCTTCA TGGATCGCTT TTCGCTCTTT
CGAGATGACG ATCTTGTGGC CTTGATTGCA CCTCGCCCGT TGCATATTCA GGCTGGGAAA
AAGGATGGAG TTCATCATCG GGAAGCTGGA ATCGAGATGG CGCCACGCTC AGCGAGTTAC
TACGAAAAAC TGGGCAAGAA GACAAACTTC GAGCATCTCG TGTTTGAAGG GGGCCACGAG
TTTCACGATG CCAGCGCCTG GGGATTTGTG GATCAACATC TCCAGCAACT TTCGCGTTGA
 
Protein sequence
MNRLNSFRYR SMALLTLCWS GFFAAAASGQ TNPEPTSNAP AAVPSIEQKP VYFEQDVTAS 
NPLRNAQAAE LERYIAYLKS DTSRLHQILQ PDYTSIEKYQ ASVEPYRRAF AQSIGYPPPG
AVPAEPAQFE KIGEDAIGIY YRATIPVLPE VHAEGIYITP KHVTKPAPLV IAMHGGGGSP
EVALFKGGAN YHDMVRGGVK RGYVVFAPQH LFKADAYPAD IRRQIDNRLR HQGTSITAVE
IAKITRSLDV LLQRPEVDPT RVAMVGLSYG GFYTLVTTAL EPRIHVAASS CYYGVQESRY
RENELSVPSD FCFMDRFSLF RDDDLVALIA PRPLHIQAGK KDGVHHREAG IEMAPRSASY
YEKLGKKTNF EHLVFEGGHE FHDASAWGFV DQHLQQLSR