| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2929 |
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| Symbol | |
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| ID | 9139641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 3791806 |
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| End bp | 3792789 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003630950 |
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| Protein GI | 296123172 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.712071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCACC GACGCCAATG CCTGAAATCT CTGCTGACGG GAGGAGTGGC CTGCCTGCTG
AATCTGAACT CACCACCCAC CCCGGAATTC GGCCACCTTT TCTCAAAGCC TGCCGCAGGG
AACGAACTGG CCTTACCCGC AAAGCTGCAA ACCGGCTTCA GTCTGTATGG AGTTACCGAC
CAGCCACTTA CCGCCGCTCT CCAGCAGATT GCCGAGACTG GTTACGGAGG GATTGAACTT
CCTCTCCTTC CGGGCGGTTT GTTCGATCCT CTCAAGCTGT CGGCTGTCGA CTGCCAGGTG
ATCCGTTCAC AGATCGAAGC CGAATCTCTC GACCTGCAGG CTGTCATGGA GAACCTGCCC
CTCTTGAACC AGAACCTCTC AGCCGCAGAT GACGAGCAGC GTCTGAAGCG AGCTTTCTAT
GTCTCACGCA AAGTTTCTCC TGAGACACAG CCATTGCTGG AAACGATTCT CGGCGGTAAA
CCGGGAGATT GGCCGCAACT CAAAAACTTC GCGATCGATC AGTTGGGCCG CTGGGCAGAA
CTCGCGAAGT CGGAAGACGC AGTGATCGCG ATCAAGCCTC ATATCTCGAA CGCACTTCAG
AGGCCTGACG ATATTGCCGG AGTCTTCGAC GAAATTCGCA GCCCCTATTT ACGGCTGGCC
TTTGACTATA GTCACCTCGA ACGACAGCGC ATCCCCATCG ATGTCGCCGT CCGAACCTTG
GCCCGTTATT CGGTCTTTGT GCATGTGAAA GATAACGTCC CGGCAGGAAC CGGCTGGCAA
TTCGCCCTCC CCGGCCAGGG AACAACCGAT TACGCGACGT TATTCACTTC ACTCAAAGAA
GCCGGCTATC GCGGACCAAT CTGCGTCGAA GTCTCCAGCC AGGTCTTCTC GAAACCCGGC
TTCAGCAGCA AAGAAGCCAT CACCAACACC TGGACCGCCT TAAGACCCGC CTTCGAAAAG
GCGGGCATCA TTACCGTAGC GTGA
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| Protein sequence | MLHRRQCLKS LLTGGVACLL NLNSPPTPEF GHLFSKPAAG NELALPAKLQ TGFSLYGVTD
QPLTAALQQI AETGYGGIEL PLLPGGLFDP LKLSAVDCQV IRSQIEAESL DLQAVMENLP
LLNQNLSAAD DEQRLKRAFY VSRKVSPETQ PLLETILGGK PGDWPQLKNF AIDQLGRWAE
LAKSEDAVIA IKPHISNALQ RPDDIAGVFD EIRSPYLRLA FDYSHLERQR IPIDVAVRTL
ARYSVFVHVK DNVPAGTGWQ FALPGQGTTD YATLFTSLKE AGYRGPICVE VSSQVFSKPG
FSSKEAITNT WTALRPAFEK AGIITVA
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