| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2888 |
|---|
| Symbol | |
|---|
| ID | 9139600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3744068 |
|---|
| End bp | 3745363 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003630909 |
|---|
| Protein GI | 296123131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0559455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGT TCTCGCTGAA CGCTCGCAAG GGTTTCACCC TGATCGAGCT CCTCGTGGTG
ATCTCGATCA TCGCGATCCT CATCGCTCTC CTGTTGCCTG CACTGCAGTC AGCTCGCGAA
GCAGCCCGTA AGACACAGTG CAAGAACAAC CTGCGTCAGG TTGGCATTGG TCTCAACGCC
TTTGCTGATA CCGATCCAGG CGATCGTCTC TGCACCGGTC AGTTCGACCG CTTCCGCGAT
GGTTGCGTTG ATACCTACGG CTGGACAGCC GACCTGGCTC GCGTCAACGC TGGTAAGGCA
CACGAAATGC GTTGCCCAGC TAACCCCATC CGTGGTTCAG AAAAGCTGAA CGACCTCCTC
CGCGGTAACG TCACTTCGAA CAGCTCGATT CCTCTGGCTG ATCGTCTCGA CGCCTGTAAC
ATTGACAGCG TCTGCTACCA GATGAACGCT GCTGGTGTTT CCGGTACAAC TGCTGCTCCT
TTCGTGGCAC GGTTGATCAA GGACGGCCAT AACAGCAACT ATGCTTCGAG CTGGTTCATG
AGCCGCACGA ACTTCAAGAC CACCAACAGC GGCAACGACC CATTCGTGCT CGCCGACTTC
ACCACAGTCG CCACCATTTC CGTCGGTGGT ACAGCTTGCC CAGCAGTGAC TGGCACACAG
ATCTACCGCG ATGGTCTGAA AGAGTTCCAG AACACAGTGG GCCCCCTCAC ACGTCGTTTC
CTCGAAGGTG CTGACGTTCC TTCGAACAAC GTGCCACTCC TGGGCGATGC TTCTCCTGGT
GACATCAACG AAGCTGTTCT CTCGGACAAC ATCGTTGACA GCGAAGGTAA GCTCGTTGAT
CCCGCTTTGA CCGCTGGTGC TCGCCTCGGC GAAACCGCCA ACGATGGTCC TGGCCAGATC
ACCAGTGCCA ACCGCCTCCG CCTGCTCGTC ACCAACGACG TGGCAACAGC AGCTCTGGCT
TACACCGGTT ATCCAACAGC TGGTACAGCT GTCACCAGCA CCGTGATTTC TGCTTATGCT
CCAAGCGCAA TCTGGATGCT GCAGGATACT CGCGACTGGT TCGCTGTTCA CCAGTCATCT
GCCAACATTC TGATGGCCGA TGGTTCGGTT CGTGAAGTTG TTGACCTCAA CGGAGACAAG
TTCTTCAACC CAGGTTTCAA CTACGACATG GCCACTCCAC CAGCTGCTGA ATCACAGGGC
TTCACCAGCA ACGTTGTTGA AGTCAACAGC TTCGAAATCT TCTGCGGTCC AACACTCGCC
ATCCGCGCTG TGACCAAGGG TCGCTTCGAA GAGTAA
|
|---|
| Protein sequence | MKKFSLNARK GFTLIELLVV ISIIAILIAL LLPALQSARE AARKTQCKNN LRQVGIGLNA
FADTDPGDRL CTGQFDRFRD GCVDTYGWTA DLARVNAGKA HEMRCPANPI RGSEKLNDLL
RGNVTSNSSI PLADRLDACN IDSVCYQMNA AGVSGTTAAP FVARLIKDGH NSNYASSWFM
SRTNFKTTNS GNDPFVLADF TTVATISVGG TACPAVTGTQ IYRDGLKEFQ NTVGPLTRRF
LEGADVPSNN VPLLGDASPG DINEAVLSDN IVDSEGKLVD PALTAGARLG ETANDGPGQI
TSANRLRLLV TNDVATAALA YTGYPTAGTA VTSTVISAYA PSAIWMLQDT RDWFAVHQSS
ANILMADGSV REVVDLNGDK FFNPGFNYDM ATPPAAESQG FTSNVVEVNS FEIFCGPTLA
IRAVTKGRFE E
|
|---|
| |