| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2882 |
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| Symbol | |
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| ID | 9139594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 3730827 |
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| End bp | 3733130 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003630903 |
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| Protein GI | 296123125 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCA TAGCACGAAA ACTGGCGCTG GGAATCACAG GGCTGGCGCT TACCGTCTCC
TGGATCGGCT GTGCTCATCA GGGGATACAA TCTCCTCTGG CGAGATGGCG GGGAGAATTG
TCGCCGAAGA CTCAGACCGT TTCCGCCGCG AAAGCTTCGC ACGGTGCCAA CGCTTCCCCA
TCAAAGTCGA ACGCAGGCCT CTTATCTCGC CTCACGAAGC GTCCCACGAA AACTGCCAAA
CCCAGTGCCA AGCCCGTCAA CGATTCCGCA CTCTGGCTGG AGCAGGCGGC TCAGGCTGAA
ATTGGTGGCC GACTCAAAGA AGCACAAGAC CTGTATGCCA AGGTTTGTCA GGCAGAACCC
GGTCATGTGC TGGCCTGGCA TCGTCTCGCG GTCGTCACCA CTCAACTTGA TGATTTTCCG
ACCGCCTGGA GCCACTATCA GGAAGCACTC AAGCTGGCTC CTGACAATGC GGATATCTGG
AGTGATGCCG GCTATTGCCT GTTCCGGCAA GGGAGTTACG AGCAGGCCGA AAAGCATGTG
CGCGAAGCGA TGAAGCAACA TCCCGATGAA TCTCGCTATA TCAATAACCT CGCTCTCATT
CGCGGGGTGC AAGGCCATGC GGATGAAGCA CTTGGTTTGT TCAAAAAATG CCACGACGAA
GCGACCTCTC TGGAGTTTAT GGCCCAGATT CATGAGTTGA GGAAAGATCC AGCGGCTGCG
AAATCGGCTC GTGATCAGGC CCAGGTGGCT CGTGCGAAAA AGACTTCTCA AACATTGGCT
GCGACGACAG GTGGGATTCC AGAAGCCGTC TCCCCAGAGG CTTCAGCCAG TAAGAAAGCT
CTGGATTTTC CGACTGAACC CAAAGAGGCA GCTACCGCGG CAGCTTCTGC TCAGGTGAGC
TCAACATCAT CACCATTGGC TGATCCCGCA GTGAAAGCCG CTGCCTACCT GGTGGACGAA
TTACCCCCTT CGCCTTCGAT GGCCAAACCT TTAGCAACTG CAGACAGTGC TCCCTCCTCT
AGCCCATCGT TGTCGAATCC ACCAGCCGCA GTCGCTCCAG CAGTGGTTCC ACTGGGGCAT
CGACTGGCGA TTGGTAACCA GCCGCGAGCG ATGGAAGTTG TGCCTCCTCC TCAAGTGAGT
CAGATCGCGA CGAGACCTGC TGTTCCCGCG GTAGCTCAGG GGACGATTTC GATTGTGAAG
TCACGCCCGC TATCGACTCC GGTCGAGAGT CTGCTGCCGA TTATTCAACC TGCGGTGATG
CCCGCTTCAG GCGTCTTGCA GAGTTCAACT GCACCAATTG TTCAGCCACC TGCACAGCAA
ATTCCAGCAC CGCAGCTTCT GGCAGATCGT ATACCGGCAA CAGATCCAAA ATCGGTTGCG
TCAACTGTGA GCGAGACTCC GGCACCATTG CCAGCGGCCG TCATCACGAG AGCTGCACAT
ACCCAAGCCG GAGATGAGGA GCGTCTTCCT GCTCGTACAG AACAGCGAAT CGTCTCGGAA
TCCTCGCTGA TGACGACAAT CGTGTCGCGA GTCAGTCCAC AGGATGTGAC AATCAATCAG
ATTCATGCTC CGCGCACGTT CCCGATGGAT GCGGTCGAGG TCGAAACGGA AGATCCTGGG
GATGCACCCA TTTTTGTCAT TCGCGGGCAA AGCCAGGACG CTGCAGCACC TTCGAATCTT
CCCGTGCCAG CCCCAGCGGA AGCATTGCCA GAGCGGTTAG AGACACAGCC AGAATCGACC
CAGACTTTTC CTGTCAAAGT GCCCGAGAGC GTGGAAAAGA GTTCTACCGA TGTGAGTGAT
GTTGCAGCAG AGCTGGCTGC AGGGCCAGCC CCTTTCCCGG AGTCATCCAA GCTTCAGCCA
CAAGTAAAAC AGCAGATTCG TGCTGTGGAT GTCGAGTGGT TTGATTCGCG TCGTCAGCAG
ATTTTAGGGC GTCAGCAGCA GGATCTGTTC TGTGGCTACT GCCCGGTGGC CTTGCGGGAG
GCACGCGAGC TGGTGGATGG CCGACCGGAG TTTGCCTGCG AAAGCGATGG ACAGCGAATT
CTGTGCAGCA GTGCCGAGGC GTTAAAGCTC TTCCAGAGCG ATCCTTCGAG ATATCTGCCG
GTCAAAGCGG GGCAGGATCT GGTACTCTCG AAGGAAAGTT CTTCAGCCGG CAAACCCGAT
GAATTGCCAA CCCCAACGAG CCCGCCTGCA AGCCGCGGGA ACCTGGCTTA TGCCAGTTGG
TACGAGGGAA AGCTCTATTT CTTTCAGTCA GCCGCCGCGC TGAAAGAGTT TCACGAGCAT
CCTGAAAGCG TCGTTCTCCC GTAA
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| Protein sequence | MKRIARKLAL GITGLALTVS WIGCAHQGIQ SPLARWRGEL SPKTQTVSAA KASHGANASP
SKSNAGLLSR LTKRPTKTAK PSAKPVNDSA LWLEQAAQAE IGGRLKEAQD LYAKVCQAEP
GHVLAWHRLA VVTTQLDDFP TAWSHYQEAL KLAPDNADIW SDAGYCLFRQ GSYEQAEKHV
REAMKQHPDE SRYINNLALI RGVQGHADEA LGLFKKCHDE ATSLEFMAQI HELRKDPAAA
KSARDQAQVA RAKKTSQTLA ATTGGIPEAV SPEASASKKA LDFPTEPKEA ATAAASAQVS
STSSPLADPA VKAAAYLVDE LPPSPSMAKP LATADSAPSS SPSLSNPPAA VAPAVVPLGH
RLAIGNQPRA MEVVPPPQVS QIATRPAVPA VAQGTISIVK SRPLSTPVES LLPIIQPAVM
PASGVLQSST APIVQPPAQQ IPAPQLLADR IPATDPKSVA STVSETPAPL PAAVITRAAH
TQAGDEERLP ARTEQRIVSE SSLMTTIVSR VSPQDVTINQ IHAPRTFPMD AVEVETEDPG
DAPIFVIRGQ SQDAAAPSNL PVPAPAEALP ERLETQPEST QTFPVKVPES VEKSSTDVSD
VAAELAAGPA PFPESSKLQP QVKQQIRAVD VEWFDSRRQQ ILGRQQQDLF CGYCPVALRE
ARELVDGRPE FACESDGQRI LCSSAEALKL FQSDPSRYLP VKAGQDLVLS KESSSAGKPD
ELPTPTSPPA SRGNLAYASW YEGKLYFFQS AAALKEFHEH PESVVLP
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