| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2852 |
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| Symbol | |
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| ID | 9139564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 3696837 |
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| End bp | 3698399 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003630873 |
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| Protein GI | 296123095 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAAG TCTTCAATAT GCCGAATTTC TTCTGTAAGG CGACTATGCG TTTGGAATTA
CTTAAATCGA TTCTGATGGG AAGGCATCCA TTCCATGGGC ATGCCTCAAT TTTCAAATGT
CGATCGTTCT GTTTGCCTGA AGTCAGGCAG TCGAATTGCC TGAAGGCCAT CAAGATGCAG
TCAAGATTTC ATCAACTAAA GCGACACTGC TCACCGGCAT GTTCGCGAAC TTGGCGATCC
TGGTGCCCTC TCGCATTCGC TGCAGCTTTG ATTGTCACTA TTGCCGGCTG TGCAAAGCGT
CTCGAAGAAC ATCACGCCGA GCATCATCTG GTGAAAGTCA CCAGTGCTAT CGCCAAAGAC
ATGCAGATCA CCGAGCAGTA TGTCAGCCAG ATTCATTCCT GCCGCCATAT TGAACTGCGT
GCCCTCGAAA GTGGCTACCT CGAAGAAATC AAAATCAAGG AAGGCCAGTT TGTTAAAAAA
GGTGACATCC TCTTTCGTGT CCTGGCAACC CTCTATCAAG CCCGCCTCGA GTCCGATATC
GCCGAAGCAC AACTCGTAGA GATCGAATAT AAAAATACGA AGAAACTATT TGAGCAAAAG
GTCGTTTCCG AGCAGGAAGT GGCTCTGGCA CAGGCCAAAC TTGCTAAAGC CAATGCCAAA
GTGAAACTGG CTCAAGCCGA GCTGAATTTC ACCGAAGTTA AAGCTCCTTT TGACGGGATT
ATTGATCGCC TTCGCCAGCA GCAAGGCAGC CTTGTTGCCG AAGGGGATAT TCTCACGACA
CTCTCTGATA ACAATGTCAT GTGGGCCTAC TTCAATGTCC CCGAAGCCAG GTATCTGGCC
TATCAGCAAG AGGTCAAAGA CGGACAGGCC GATGTCAAAG TGGAACTCGT GCTGGCCAAT
CACACCACGT TTCCACTCCC CGGAAAGATC ACGGCGATTG AGGCTGACTT CAATAACACG
ACAGGCAATA TTGCCTTCCG TGCCGACTTT CCCAATCCGG AACAACTGTT AAGGCATGGT
CAGACCGGAA CCATCCTGCT GCATAAAACA TTGAAAGATG CCGTCGTTAT CCCGCAGCGG
GCCACCTTTG AAATTCTGGC TAAGCGGTTC GTTTATGTTG TCGAACCTGT GCCCGAAGGT
GATGGTGAAG GTAAAGACGA ATCTGAAATG GCCGATTCGC ACCATGCCCA GGCTCACACG
GAAGACGACG ACGACGATGA AAAAAAGGAC AAAAAGCCCT CAGCTAAACC CGCTCCCAAG
CGGCCACCAT TGCCACACGA AAAGAAACCG CACGATGACA AGCATCATGA TGATCATTTG
AAGAAACTCT CTCCCGAACA CCATGCCGAG CATCACGCGA ACACGCTCAA GGGCATCGTG
CGTCAGCGGG AGATCGAAAT ACGTAATGAA ATGGATGATA TCTTTATTAT CAGGAGTGGT
CTAAAGGCGG GTGAAAAGAT CGTTCTCGAA GGTGTGCGGC AGGTTCGAGA TGGTGACGAG
GTCGAGTTCG AGTACATCGA CCCCGTAGAG GTTCTCGGTC ATCTCAAGAA CAAAGCCGAA
TAG
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| Protein sequence | MQEVFNMPNF FCKATMRLEL LKSILMGRHP FHGHASIFKC RSFCLPEVRQ SNCLKAIKMQ
SRFHQLKRHC SPACSRTWRS WCPLAFAAAL IVTIAGCAKR LEEHHAEHHL VKVTSAIAKD
MQITEQYVSQ IHSCRHIELR ALESGYLEEI KIKEGQFVKK GDILFRVLAT LYQARLESDI
AEAQLVEIEY KNTKKLFEQK VVSEQEVALA QAKLAKANAK VKLAQAELNF TEVKAPFDGI
IDRLRQQQGS LVAEGDILTT LSDNNVMWAY FNVPEARYLA YQQEVKDGQA DVKVELVLAN
HTTFPLPGKI TAIEADFNNT TGNIAFRADF PNPEQLLRHG QTGTILLHKT LKDAVVIPQR
ATFEILAKRF VYVVEPVPEG DGEGKDESEM ADSHHAQAHT EDDDDDEKKD KKPSAKPAPK
RPPLPHEKKP HDDKHHDDHL KKLSPEHHAE HHANTLKGIV RQREIEIRNE MDDIFIIRSG
LKAGEKIVLE GVRQVRDGDE VEFEYIDPVE VLGHLKNKAE
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