Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2823 |
Symbol | |
ID | 9139535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3659212 |
End bp | 3660378 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003630844 |
Protein GI | 296123066 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.605143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACAGGTC TTCTGTTCTT CCGGTTCGAA CGTTGGCTGA TAGTCGCGCT GATCGTTGTG AATCTGTTGT GGTCTCGGAT TGAGATTGTT ACAGCCGCAC AGCCCGAAGC CGGAGTTGGT GGAGGAGATG CGAACTGGCA ACCGGCTCGA ACCTGGGTCT TCTGTGTGGG GTTGCTGAAG TGGGAAAACC CGCAGTACGG CCCGTTCCCG CAAAAACATC GCCGTGATGC CGAGATGCTG CAGGTTCTCA AAGAGTGCGG CGTGCCAGCA GCTCAGATCA CGTATCTCTG CGATGAACAG GGAACCACAG CCGCCATCGA AAAGGAGTTC ACTCGATTTC TCAAGCAGCC GGCGAAAGAC GATCTCGTCA TCGTTTACTA TTGCGGGCAT GGCTACAACA CGAGCGATCA CAAACAGACC TTCCTCGTCA GTTATGATAC GGCTGGTGCC AATCGAGGCT GGGAAGTCGC GACTATTCCT CGTGAGATCA ATCGGTTGTG TCGGGCACAG CGCGTGGTCA TCGCCCTCGA TCATTGTTTC TCCGGTGCCA TGGCCGAAGC GGTACGCCGG CTTCCCAACC CTAAAGTTTC GTTCGCAGTG CTGGCATCGG CTCACCACAA TTCGAGTTCA ACAGGGAATT GGACATTTAC CGAAAATCTG ATTTCAGCTT TTCGAGGCCG CGGTTACATG GATGATGACG GCAACGGCCA GATCACGTTC TCAGAGCTGG ACGCGAATAT TGAACTTGAT ATGGCTTTTG CCGAGCGTCA GATGTCGCAG AGTTTGTTCA CGAAAGGGTT CGACCCGAAC TTCGTCATTC GTGCATCTCA CAAGCCGACA GACCCGGAAA TTGGCCAGAG AACCGAAATC GAGTGGCATG GAAAGTACTA TCGGGGCTTT GTCATCGGTC GTAATGGAGC ATTGAGCCGG GTGCATTACT ACGGCTATCA GGAAAGTGAC GACGAGTGGG TGACTCCCGA ACGTTTGAGA ACGCCGACTC CTGTGACCAG GCCCATCAAC AGCCCGGTTG AGATTTGGTG GAAAAGCGAA TGGTATCGAG GAAGGATTAT CGGAGTGAAG CACGGCCTGC ATCTGGTCAA GTATGACAAA TGGGGGCCCG AATGGAATGA ATGGGTGACG ATCCACCGTC TGCGGGATGT GAAATAG
|
Protein sequence | MTGLLFFRFE RWLIVALIVV NLLWSRIEIV TAAQPEAGVG GGDANWQPAR TWVFCVGLLK WENPQYGPFP QKHRRDAEML QVLKECGVPA AQITYLCDEQ GTTAAIEKEF TRFLKQPAKD DLVIVYYCGH GYNTSDHKQT FLVSYDTAGA NRGWEVATIP REINRLCRAQ RVVIALDHCF SGAMAEAVRR LPNPKVSFAV LASAHHNSSS TGNWTFTENL ISAFRGRGYM DDDGNGQITF SELDANIELD MAFAERQMSQ SLFTKGFDPN FVIRASHKPT DPEIGQRTEI EWHGKYYRGF VIGRNGALSR VHYYGYQESD DEWVTPERLR TPTPVTRPIN SPVEIWWKSE WYRGRIIGVK HGLHLVKYDK WGPEWNEWVT IHRLRDVK
|
| |