| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2813 |
|---|
| Symbol | |
|---|
| ID | 9139525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 3651122 |
|---|
| End bp | 3652141 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1559 |
|---|
| Protein accession | YP_003630834 |
|---|
| Protein GI | 296123056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.198152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACG CCGTTCCGTC ACGAAAAGCT TTTACTCTGA TTGAACTTCT GGTGGTCATC
GCCATCATCG CCATTCTGAT TGCACTGCTG CTTCCCGCAG TTCAGCAAGC ACGAGAAGCT
GCCCGTCGCA CGCAGTGTCG CAACAATCTC AAACAGTTGG GGCTGGCACT TCACAACTAT
CACGATAACA GCAACATCCT TCCTCCAGGC AATATCTGGC GACTCAACGG CACGAATCAG
AACCGCCCCT CGAACAATGG CGATACATTG GATCAGAACC GCAACCTGGG CCCCAACTGG
ATGGTCTTCA TCCTTCCATT CATCGATTCA TCCCCCCTCT ACAATCTTCT CGACATCAAC
AGCGCGATGT CGATCAATAC CGGCAACAAC GCCACCATTC GCAGTACGAT CATCAGTGGT
TATCTCTGCC CCTCCGATTC GTTTAACGGC ACGTTGTTAA ACCGCTATAA CACCTTCGAT
AATGCTGGTA CAGCGGGTAC TGCCGGCCCT CGCTGGGCAC GTGGAAACTA CGGCGCCAAC
ATGGGACGCG AACGAGGTGG AGTCACATCT CAATATGCTG CTGATACCGG CGATCGCCGA
GGTGCGATGG GTTACGGAAG CGGCGCTCGC ATGCGAGACT TCACTGACGG CACCAGCAAT
ACAGTCATGG TCTGGGAAAT GCGTGCCGGC ACAAGTGACC AGGATCCCCG CGGCACGTGG
GCTTTGGGTC GTCAAGGCAC CAGCATGGTG GGCGGTTGCG ATAATGTCGG GGACTGCCCA
GGTATCAACC CTGGCAACAG CAATTCGGAA GATGTTCACG GCTGTAACAA CGACACAGGG
ATTCGCATGG GGTGCTTCAA CGGCGCGGAT GGACAAGGTG CACCACGCAG CCAACACACC
GGGGGTGTGC ATGCCCTTTT GGGAGACGGG ACCGTCCGCT TCATTAGCGA CAACATTGAT
TTCAACATTC ACCGCGCGTT GAACAGCGTG GCTGGTGGCG AGCAGGTTGG TGAGTTCTAG
|
|---|
| Protein sequence | MNHAVPSRKA FTLIELLVVI AIIAILIALL LPAVQQAREA ARRTQCRNNL KQLGLALHNY
HDNSNILPPG NIWRLNGTNQ NRPSNNGDTL DQNRNLGPNW MVFILPFIDS SPLYNLLDIN
SAMSINTGNN ATIRSTIISG YLCPSDSFNG TLLNRYNTFD NAGTAGTAGP RWARGNYGAN
MGRERGGVTS QYAADTGDRR GAMGYGSGAR MRDFTDGTSN TVMVWEMRAG TSDQDPRGTW
ALGRQGTSMV GGCDNVGDCP GINPGNSNSE DVHGCNNDTG IRMGCFNGAD GQGAPRSQHT
GGVHALLGDG TVRFISDNID FNIHRALNSV AGGEQVGEF
|
|---|
| |