Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2811 |
Symbol | |
ID | 9139523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3649133 |
End bp | 3650341 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Radical SAM domain protein |
Protein accession | YP_003630832 |
Protein GI | 296123054 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.524917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTTCTG CGATCCAGTC CATTCTCGAT AAAGCCGTCC AGGGAGATCG CCTGTCGTTT GATGAAGGCC TTGCCCTGAT CTCATCGCAC GATTTACCTG CGATTGGAGA TGCGGCTCAT CGTGTGACCC ATCGCCTCCA TCCCGAACCA TTTCGAACTT ATAACATCGA CCGGAATATC AACTACACCA ATATCTGCAC GGCTGTCTGC GATTTCTGTG CGTTCTATCG ACCGCCCAAA CATGCCGAAG GGTACGTGCT TTCGAAAGAA GAACTGCACC AGAAAATTGC CGAGACTGTC GAGCTTGGTG GCGATCAGAT TCTGCTCCAG GGGGGATTGC ATCCTCAGTA CAAACTGGAG TGGTACGAGG AGATGTTGAG CGGGATCAAG TCGGCCTTTC CGCAGGTCAA CATTCACGGC TTCTCCCCTC CCGAGATATA CCACTTTACG AAGGTCAATA AGCTTCCACT GAAGACCATT CTCGAACGGC TCAAAGAGGC TGGCTTGGGG AGTTTGCCCG GGGGTGGCGG TGAAATTCTC GTCGATCGCG TTCGCAAGGA GATCACCCGC GGTAAGGTGC TGACCGACGA TTGGCTCGAC GTGCATCGTG AGTGGCACAA GCTTGGCGGG AAATCGACCT GCACGATGAT GTACGGTCAT GTCGAAACAT TGGCGGAACG AATTGAGCAC CTCGAACGAT TGCGTCAGCT GCAGGATGAA ACCGGCGGCT TCACCGCGTT CATCTGCTGG TCTTTCCAGC CCGATCATAC CGAGATGGCT CACATTCCAC CGGCTGGCGC TTTTGAATAT CTGAAGACTC AGGCCGTCGC GAGGCTCTAC CTCGACAATA TTCCTAATAT CCAGTCTTCA TGGGTCACTC AAGGTGAGAA AATTGGAGGC CTCGCTTTGT TCTACGGGGC CAACGATATG GGAAGCCTGA TGATCGAAGA GAACGTGGTG GCACAAGCCG GGACAGTCCA TCATTTGACA CTGGCCACAA TTCGCCGACT TATTGAAGAT GCAGGCTATA TTCCCAGACA ACGCAATGTC TTCTACGAGT ATATCGACCA ATATCCACCA GCGCCCGGGA CAACCTTACC CGAGTTACCG CTTCCTCATC CAACAGCATT ACCTGTGACA CCCGCGATGA CTGACGATCC GAATATCACT AGCGACCTCA ATAAAAAGCT ACTTCCCGTC CTTAATTAA
|
Protein sequence | MSSAIQSILD KAVQGDRLSF DEGLALISSH DLPAIGDAAH RVTHRLHPEP FRTYNIDRNI NYTNICTAVC DFCAFYRPPK HAEGYVLSKE ELHQKIAETV ELGGDQILLQ GGLHPQYKLE WYEEMLSGIK SAFPQVNIHG FSPPEIYHFT KVNKLPLKTI LERLKEAGLG SLPGGGGEIL VDRVRKEITR GKVLTDDWLD VHREWHKLGG KSTCTMMYGH VETLAERIEH LERLRQLQDE TGGFTAFICW SFQPDHTEMA HIPPAGAFEY LKTQAVARLY LDNIPNIQSS WVTQGEKIGG LALFYGANDM GSLMIEENVV AQAGTVHHLT LATIRRLIED AGYIPRQRNV FYEYIDQYPP APGTTLPELP LPHPTALPVT PAMTDDPNIT SDLNKKLLPV LN
|
| |