Gene Plim_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2790 
Symbol 
ID9139502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3621721 
End bp3622194 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630812 
Protein GI296123034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.325665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGCC CGTGGTCATG GGATCACGGG CCATTATTTT TGCTCGATCT CATTAGTAAA 
GCGGATCTCA TGAAGCTGCC TCACTGTTTC TCAACATCTA TTCTGGCCGG GTGCCTGCTG
CTGCTCTCAG GGTGCGGCGG AGTTTCCGAT GCTCCTACAC TAGTCGTTGT GAAGGGGAAA
GTGACTCTGG ATGGCCAGCC TCTCGATACC GGCAATGTGC TCTTTGTTCC CATCGATGGA
AAAGGGCGAG CTGATGCCGG ACCTGTAGTG AAAGGCGAGT ATGAGTTGAA ATGTACGGCC
GGTGAGAAGC GTGTCGAAAT CACCTCACAA GTGGAAGCAG ATAAACCCGC TGCCGACGGC
CTTCCCGATT ACAAATCTCG GATCCCCGCG AAGTACAACC GAGCCACCAC GCTGACGGCA
ACCGTCAAAA GCTCAGGCGA AAACACCATC GACTTCGCTG TCACTTCCAA ATAA
 
Protein sequence
MCGPWSWDHG PLFLLDLISK ADLMKLPHCF STSILAGCLL LLSGCGGVSD APTLVVVKGK 
VTLDGQPLDT GNVLFVPIDG KGRADAGPVV KGEYELKCTA GEKRVEITSQ VEADKPAADG
LPDYKSRIPA KYNRATTLTA TVKSSGENTI DFAVTSK