Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2781 |
Symbol | |
ID | 9139493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3607414 |
End bp | 3609804 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003630803 |
Protein GI | 296123025 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.216427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTGGATCT CATCTTTCAA CCAACTGATG AGACTCATGG CCCTGATGGC TCTCGTGATG TTTCTGGCAA ACGGCTTCGA TCAAGCGATC TGTGCCCACG GGGCTGAGAT TCGCCTGAAG AATGGCATGA TCATCAGCGG CAAGGCGACA CCGATCCAGG GGCTTGCGCA ACTTCAGGCC AAGACGCCGG GGCCGATTCC GATCTATCCC ATCATTATGG TGGATGCCGG CTGGCAAAAG ATTTTTGTAC CGACACGCCA GATCCCTGAT GCAGAAAAAA CCGTCGGTCA GCCCGATCTG TTCCCGTGGG AAGTCTTTGA GCTCAAGCAT CATAAAACCG GCAAGCAGCA GGTGCTGGCT CAATTGGGTG GCTTTCGAAA TGTGACGTCT TTTGATGAGT TTGGCCGGCG GCGGCTGGAA ATTCTCACAC AAAAAGGGCC GGAGAATGTG ATTCAGGGGA TCAGTCGATT AACCCCGAAA TACGCACTCA TTGATGCACT CACCCATCAG TGGGAATCGG GTGTGGCAAC CAGTAGTTTG CCGACGGAAA TCCTGAGTGA CATCCTGAGG AAGGCGATTG ACCCGACTCG ACCCAAAGAT CGACTGGCGA TTGTCCGGTT TTATCTGCAG GGCGAGCTCT ATGCCGAAGC TCAAAAGGAG TTGGAATCTG TTGCGATGGA GTTTCCCGAA CTCAAAGATC AGGTCGATCG TATGCGGGTC GAACTGATTC AATTGCGCGG GCGACAGTTC GTGAAACAAC TGCAGGAGCG AAAGAAGCAA GGTCAACATC AGCTCGCCGA AAGCGTGGCC AGGCTGGCCC CTGCCGAGCA ACTGGGCCCA GTGGTGATGC GGGATATCGA GGCCTTTATC AAGCAGTATG ATCTGGCTCG CCAGCAGATC GAACTGGCCC GCCTGCTGTT GGGTGAGTAT CAGGCACAAA TCGCGAATCG CGAGCTGCGT GAGCGTGTGG CACTTCTCAG GTCGGAGGTG AGCCATGGTC TGTCGTTTGA GACGTTGCCG AGGCTGGAAG CCTTTTTGAG GTCCGACAAA GACTCCACTC TTTCCGCAGA AGAAAAGCTC GCACTCGCCT TTTCAGGATG GGTGTTTGGA TCGGTCGGTG CTTCTACCGA TCTGGCCAAG ACCATGGTGT TGTGGGATGC CCAGCAGCTC GTATTGCAGT ACCTCAAAGC CGAATCATCA GAAACCCGCG AGAATACACT CCGGCAGCTT ACAGCCCTCG AAGGAGTGGG CTGGAAATCG ATCCGCCAGA TGATTCCTCA ATTGCCACCT TTTCGGGATT CGGCGGGTCT GGAACCTGGT CAGGTTATCT CGGCAGATGG CGAGGTGCTG GAACCCCTGG CCAATGACAT GCTCAAGATC ACACTTCGCA GCGATAACGG AGAAGTGATT TTTCATTATC AGGCGATTTT GCCACCCGAG TATGACCCGG CTCATCGCTA TCCGATGATT GTCGCCTTAA GGCCGGAAGA TCGCACAACA GCCGCCATTG CGACCTGGTG GGCGGGAACT GCTGATCGTC CCGGAAATGC CCGCCGCCGG GGGTTTATTG TGATTGCCCC GGAATATGTG CCGGATGGTG CGACAAAATA CAATGGGGAA GGAGTGGCCC ATTTGAAGGT GCTGGCCGCT CTCGCGGATG CGCGCGGGCG TTTTTCCGTC GATGCCGATC GTGTGTATCT GGCCGGGCAT GCCATGGGCG GTGACGCTGC CTTCGATATG GGGATGTCGC ATGCGGATGA GTTTGCCGGT GTGATCCCCA TTTGCGGCAG GGCTGATACT TACTGCAAAT ACAGCAAAGG GAATGCTCGC TTCACCAGTT GGTACGTGGT GGCTGGTGAG CTCGACCGCG ATTTGTTGAG CATTAATGCC AATGTGCTGG AGTTCATGTT CAAAGAGGGA TTTCGGCATG ACCTCATGCT GGTGCAGATT CACGGCCGGG GCCTCGAAAT GTACTCCGAC GAAATGTCGC GCATGTTCGA GTGGATGGAA CTGCATCCGC GCAGTACGGC TCCGGCAGAT ATCGAGTGGC TTTCACTTCG CAAGACGGAT TCCCGCTGTT TTGGCCTGAG TGTGATCGAT CTCCCGCGCA CGCTGATCAT CCCGCAACCT GCGGGAACCA CCCTCCCTTC GCCACAGATC ATGAAGTTCC GCATTACGCC CGGGAACAGC GTGTACATTA CCTCGCCCGG TAAAAGGCAT GTGGTGCGAC TGGCCGCTGA AGCTTTTCAG ATCGATGAGC GAGTGAACAT CACCATCAAT AACAGTCGCA AGTTCCGGGA TTTTCTCGTG CCCGATGTGC GGTCACTGCT CGAAGAATTG CGGCAATCGG GTGATCGAAC CCGGCTGGCC GATGTGGTGC TGGAGTTCTG A
|
Protein sequence | MWISSFNQLM RLMALMALVM FLANGFDQAI CAHGAEIRLK NGMIISGKAT PIQGLAQLQA KTPGPIPIYP IIMVDAGWQK IFVPTRQIPD AEKTVGQPDL FPWEVFELKH HKTGKQQVLA QLGGFRNVTS FDEFGRRRLE ILTQKGPENV IQGISRLTPK YALIDALTHQ WESGVATSSL PTEILSDILR KAIDPTRPKD RLAIVRFYLQ GELYAEAQKE LESVAMEFPE LKDQVDRMRV ELIQLRGRQF VKQLQERKKQ GQHQLAESVA RLAPAEQLGP VVMRDIEAFI KQYDLARQQI ELARLLLGEY QAQIANRELR ERVALLRSEV SHGLSFETLP RLEAFLRSDK DSTLSAEEKL ALAFSGWVFG SVGASTDLAK TMVLWDAQQL VLQYLKAESS ETRENTLRQL TALEGVGWKS IRQMIPQLPP FRDSAGLEPG QVISADGEVL EPLANDMLKI TLRSDNGEVI FHYQAILPPE YDPAHRYPMI VALRPEDRTT AAIATWWAGT ADRPGNARRR GFIVIAPEYV PDGATKYNGE GVAHLKVLAA LADARGRFSV DADRVYLAGH AMGGDAAFDM GMSHADEFAG VIPICGRADT YCKYSKGNAR FTSWYVVAGE LDRDLLSINA NVLEFMFKEG FRHDLMLVQI HGRGLEMYSD EMSRMFEWME LHPRSTAPAD IEWLSLRKTD SRCFGLSVID LPRTLIIPQP AGTTLPSPQI MKFRITPGNS VYITSPGKRH VVRLAAEAFQ IDERVNITIN NSRKFRDFLV PDVRSLLEEL RQSGDRTRLA DVVLEF
|
| |