Gene Plim_2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2746 
Symbol 
ID9139458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3561245 
End bp3562696 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content48% 
IMG OID 
ProductPBS lyase HEAT domain protein repeat-containing protein 
Protein accessionYP_003630768 
Protein GI296122990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.722344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACG CCGCATTCAT TTTAGGGATC GTCGTAATAA TCTCCATAGG AACCTTTATT 
ACATATCGAA TGCTCAGGCC TCGCCATGGC GAAAATGGTG GTTTTAGCGA CTGGTTGAAA
AATCCCGACT ACAAGCAAGC CGCTGCTGAC TATTTCGCCG CTCGAAAAGC GTTAACGATC
CCTGACGATA TTTCGGATGA AGAAATCCAG AAAATGGTCG ATCAACTCTT TGATGAGAAG
GACAAACACT TCAACTTTGA TCGTCTTCAA CTGGTCGGCA TGAAGGCTGT ACCAATGCTT
ATTAATGCAC TTAACAATCC CAAAACCGCT TCGATGAAAT TCGGTGACGG AGGTTATGTC
CCTGGCCCGG CATCGCCTTT CGAGCGAATT GCCGATCTAC TAGAGTCGTC TGGGTCGCCC
CAGGCAGCAC AGCCTCTGGC TAAATATATG CAGCATAATG ACAGCTATTT TCGCAAGTAT
GCTGCTCATG CTCTAGGTAA CATCGGCACG TCTGAATGTA TTGAGCCGAT GCTGATCGCT
CTGGGTGATG ATGACGACTA TGTTCGCTCT TTCGCGATGA TGGGTGTCGA AGGAGGAATT
CGAGCCAAAC GATGCACCCC GGAATTCCTC GATGCCATGG TTCCAGCATT AACGAAACTG
CTGGATCGTC CCGATAACTC GGTCAGTGGT CGTGCTCCTG GACTATTGCT TGCAATCGAT
ACCAATCGTG CGATGTCTAT TCTGCTCTCT TCCGATTATT TTTCCATCGA GAACAAACAG
CTTCAGTACA TCATTCGGGC ATTGAATACA GCAGGCCATA AAATTCCTCA TGACACACTT
CTGCCGCTCC TTAAGACGCT GAAGCCTCTC GTTGCCGATT ACCCTCATGA CTACAATTAT
TCCGAGGCAC TTATCGCTTA TGCAAATCAC CCTGATGCCT CAGCAGAAGA GTTGTTTCGA
TTGGAATTGA CGTCAGGTAA CGAGAAGATT CAAAGAGCTG CAGCAGAGGC ACTGGCGATA
TTGTCTGGTG TGACGAATGC GCGCGAGGTC ATCTTTGATG CTTTGGATAA ACAAGGGTTC
GATCAACTCT CTTCGCCTCA GAAGCACTAC TACGCTGTAT TTATGTACGA CAGCGAAGTC
TGCAACGGAG GGCATTCACA ATATTTCGTG AATTCATCGG GCGATCACTG GAAGTCAGCT
CTTGCTGGAT TAAAGGCGAT CGGTGCTGAG AAGCGTGCAT TAATCTTACA GGAGGCAACC
AAGTTGTTTG GAACTGCGGG TCCAGCGGTT GATAACGACA CCCGGCACCG TCAGCTCGCC
GCTTTTACCA GTAAAAAAGA TCAAGTTGTT GATGGGTTGG ACACTCGCTA CTACGAATGT
AGTGAAAATG TGGAAGCCCT ACTGGCATTG TATGCGATCA AACATAAAGA ACACTTTGTA
GTCCCAGATT GA
 
Protein sequence
MKYAAFILGI VVIISIGTFI TYRMLRPRHG ENGGFSDWLK NPDYKQAAAD YFAARKALTI 
PDDISDEEIQ KMVDQLFDEK DKHFNFDRLQ LVGMKAVPML INALNNPKTA SMKFGDGGYV
PGPASPFERI ADLLESSGSP QAAQPLAKYM QHNDSYFRKY AAHALGNIGT SECIEPMLIA
LGDDDDYVRS FAMMGVEGGI RAKRCTPEFL DAMVPALTKL LDRPDNSVSG RAPGLLLAID
TNRAMSILLS SDYFSIENKQ LQYIIRALNT AGHKIPHDTL LPLLKTLKPL VADYPHDYNY
SEALIAYANH PDASAEELFR LELTSGNEKI QRAAAEALAI LSGVTNAREV IFDALDKQGF
DQLSSPQKHY YAVFMYDSEV CNGGHSQYFV NSSGDHWKSA LAGLKAIGAE KRALILQEAT
KLFGTAGPAV DNDTRHRQLA AFTSKKDQVV DGLDTRYYEC SENVEALLAL YAIKHKEHFV
VPD