Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2746 |
Symbol | |
ID | 9139458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3561245 |
End bp | 3562696 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | PBS lyase HEAT domain protein repeat-containing protein |
Protein accession | YP_003630768 |
Protein GI | 296122990 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.722344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATACG CCGCATTCAT TTTAGGGATC GTCGTAATAA TCTCCATAGG AACCTTTATT ACATATCGAA TGCTCAGGCC TCGCCATGGC GAAAATGGTG GTTTTAGCGA CTGGTTGAAA AATCCCGACT ACAAGCAAGC CGCTGCTGAC TATTTCGCCG CTCGAAAAGC GTTAACGATC CCTGACGATA TTTCGGATGA AGAAATCCAG AAAATGGTCG ATCAACTCTT TGATGAGAAG GACAAACACT TCAACTTTGA TCGTCTTCAA CTGGTCGGCA TGAAGGCTGT ACCAATGCTT ATTAATGCAC TTAACAATCC CAAAACCGCT TCGATGAAAT TCGGTGACGG AGGTTATGTC CCTGGCCCGG CATCGCCTTT CGAGCGAATT GCCGATCTAC TAGAGTCGTC TGGGTCGCCC CAGGCAGCAC AGCCTCTGGC TAAATATATG CAGCATAATG ACAGCTATTT TCGCAAGTAT GCTGCTCATG CTCTAGGTAA CATCGGCACG TCTGAATGTA TTGAGCCGAT GCTGATCGCT CTGGGTGATG ATGACGACTA TGTTCGCTCT TTCGCGATGA TGGGTGTCGA AGGAGGAATT CGAGCCAAAC GATGCACCCC GGAATTCCTC GATGCCATGG TTCCAGCATT AACGAAACTG CTGGATCGTC CCGATAACTC GGTCAGTGGT CGTGCTCCTG GACTATTGCT TGCAATCGAT ACCAATCGTG CGATGTCTAT TCTGCTCTCT TCCGATTATT TTTCCATCGA GAACAAACAG CTTCAGTACA TCATTCGGGC ATTGAATACA GCAGGCCATA AAATTCCTCA TGACACACTT CTGCCGCTCC TTAAGACGCT GAAGCCTCTC GTTGCCGATT ACCCTCATGA CTACAATTAT TCCGAGGCAC TTATCGCTTA TGCAAATCAC CCTGATGCCT CAGCAGAAGA GTTGTTTCGA TTGGAATTGA CGTCAGGTAA CGAGAAGATT CAAAGAGCTG CAGCAGAGGC ACTGGCGATA TTGTCTGGTG TGACGAATGC GCGCGAGGTC ATCTTTGATG CTTTGGATAA ACAAGGGTTC GATCAACTCT CTTCGCCTCA GAAGCACTAC TACGCTGTAT TTATGTACGA CAGCGAAGTC TGCAACGGAG GGCATTCACA ATATTTCGTG AATTCATCGG GCGATCACTG GAAGTCAGCT CTTGCTGGAT TAAAGGCGAT CGGTGCTGAG AAGCGTGCAT TAATCTTACA GGAGGCAACC AAGTTGTTTG GAACTGCGGG TCCAGCGGTT GATAACGACA CCCGGCACCG TCAGCTCGCC GCTTTTACCA GTAAAAAAGA TCAAGTTGTT GATGGGTTGG ACACTCGCTA CTACGAATGT AGTGAAAATG TGGAAGCCCT ACTGGCATTG TATGCGATCA AACATAAAGA ACACTTTGTA GTCCCAGATT GA
|
Protein sequence | MKYAAFILGI VVIISIGTFI TYRMLRPRHG ENGGFSDWLK NPDYKQAAAD YFAARKALTI PDDISDEEIQ KMVDQLFDEK DKHFNFDRLQ LVGMKAVPML INALNNPKTA SMKFGDGGYV PGPASPFERI ADLLESSGSP QAAQPLAKYM QHNDSYFRKY AAHALGNIGT SECIEPMLIA LGDDDDYVRS FAMMGVEGGI RAKRCTPEFL DAMVPALTKL LDRPDNSVSG RAPGLLLAID TNRAMSILLS SDYFSIENKQ LQYIIRALNT AGHKIPHDTL LPLLKTLKPL VADYPHDYNY SEALIAYANH PDASAEELFR LELTSGNEKI QRAAAEALAI LSGVTNAREV IFDALDKQGF DQLSSPQKHY YAVFMYDSEV CNGGHSQYFV NSSGDHWKSA LAGLKAIGAE KRALILQEAT KLFGTAGPAV DNDTRHRQLA AFTSKKDQVV DGLDTRYYEC SENVEALLAL YAIKHKEHFV VPD
|
| |