Gene Plim_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2721 
Symbol 
ID9139433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp3531193 
End bp3531933 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content55% 
IMG OID 
Productpseudouridine synthase 
Protein accessionYP_003630743 
Protein GI296122965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0403839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAT GGCACATTCT CTTCGAGGAC AATCATTGCC TGGTCGTCGA GAAACCGGCT 
GGTGTCTTGA CGATGGGTGA CGAAACTGGT GACGAAAACA TGGTGCAATT GGCCATGGAC 
GACTTGAAAA TTCGTCATCA GAAGCCCGGC AACGTCTATG TGGGACTCGT TCATCGACTT 
GATCGGCCAG TTTCCGGCGT GCTGCTGTTG GCAAAAACGT CGAAAGCCGC CTCAAGGCTT 
TCGGCACAGT TCCGCGAGCG TGAACCCGAG AAAGTCTATC TGGCAATTGT GGAAGGCCAG 
CTAAACCCAG CAGCGGGAGA AATCGTCGAC TGGTTAATCA AAGACCAGGA GCGAAATCAT 
ACCCGGGTGA CATCCCCTCA AACGCCCGGT GCCAAGCAGG CAAAGCTCCG GTATCGTCAA 
CTCGAAACGC TGGTAACGCC TGAGGGAATA CGAACTTTGG TTGAAGTGCA GCCGATGACT 
GGGCGCAGCC ACCAGATTCG TGTCCAACTG GCCCATGCAG GTGCCTCGAT CCTGGGTGAT 
CTCCGCTATG GTTCAAAAAC TCCGCTGGGC AAGATGATTG CCCTGCATGC CCGGTCGCTG 
ACCTTTGAGC ACCCGGTTCA GAAGCAACCG CTCACGATTT ACGCTCCGCT GCCCAGCGAC 
TGGAAGCCTT TCATGAACCC GCTGCTCTGG GAAAAATTTC AGACGGCAGG AGAGAGTGCG 
GCAGAGTCTA GCCACAGATA G
 
Protein sequence
MKRWHILFED NHCLVVEKPA GVLTMGDETG DENMVQLAMD DLKIRHQKPG NVYVGLVHRL 
DRPVSGVLLL AKTSKAASRL SAQFREREPE KVYLAIVEGQ LNPAAGEIVD WLIKDQERNH 
TRVTSPQTPG AKQAKLRYRQ LETLVTPEGI RTLVEVQPMT GRSHQIRVQL AHAGASILGD 
LRYGSKTPLG KMIALHARSL TFEHPVQKQP LTIYAPLPSD WKPFMNPLLW EKFQTAGESA 
AESSHR