Gene Plim_2653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2653 
Symbol 
ID9139365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3437575 
End bp3438987 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content54% 
IMG OID 
ProductAAA-4 family protein 
Protein accessionYP_003630675 
Protein GI296122897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.348208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCA CTCCCGAACA AATCGACGCC TGGCGTGCGG CACGCTCGGA ACATCAAAAC 
CTCGAATTCA AAGAGGCCAA GAACCAATTC GATAACCGCA AGCTCTTCCG CTATTGCGTC
GCTTTGGCCA ACGAAGGGGG CGGGCACTTG CTGCTGGGAA TCGAAGACGT TCCACCTCGC
AAAGTGGTGG GAACGGCTGC ATTCAACGAT CCGGTGGAGA TGGCCGCGAA GATATTTCAA
ACTTTGAACT TTCGAGTCGA AATCGAGGAA GTTGCTCATC CCGATGGCCG TGTTCTCGTG
TTTCATATCC CCAGCCGGCC CTTGGGAACC GCCTATCAAT ACGAAGGTGC TTACCTGATG
CGGGCGGGCG AAGAGCTTGT CGCGATGAGC GAAGATCGCT TGCGGCAAAT CTTTTCCGAA
GGTCAACCTA ATTGGCTTTC ACAACCCGCA AAGACCGATG CCAGTGACGA TGAGGTCATT
GCGTTGCTCG ACACGCAGGC TTACTTCGAC CTGATGAAGT TGCCCTATCC TACCCAACGA
ACGGGCGTTC TGGAAAGATT GGCGAGCGAA GGATTGATCA AAGGCGACTC GAATGGGTGG
GAGATTTCGA ACCTCGCTGC CATTCTTCTG GCGAAAAGAC TCGATGGGTT CTCGCACGCA
CTGGCAAGGA AAGCGCCCCG TGTGGTGATC TACGACGGTG TGAACAAACT CAAGACAAAA
GATGACAAAC CCGGAATGCG GGGCTACGCC GTAGGATTCG AGGCGTTAGT GGACTTTGTG
CATTCGGCCG CACCGCAGAA TCGGTTCATC GAAGAAGCCG TGCGAAAAGA AGTCAAAATG
TTCCCGAAGC AAGCCCTTCG CGAACTTATT GCGAATGCAC TTGTTCATCA AGACTTTCTG
ATGACCGGAG CATCCGTGAT GATCGAGATG TACGACGATC GAGTGGAAAT CTCGAATCCC
GGACTTCCAC CGATCCAGGT CGAGCGATTC ATTGATGAGT ATCGCTCCCG AAACGAACGC
CTGGCCGATC TGATGCGTCG GCTGGGAATC TGCGAGGAGA AAGGCAGTGG CATCGACAAG
GTGATCAGTG CGTCGGAAGT GTTTCAACTT CCCGCCCCAG ATTTTCGCGC CGGAGAGTTG
CGAACCACGG CTGTCCTGTT CGCCCATCAA GATTTTCCGG TCATGACAAA GGCGGATCGC
ATCCGAGCGT GCTATCAGCA CTGTTGCTTG CAGTACGTGA GCGGGCAGCG GATGTCAAAT
CAGTCGCTCC GGCAGCGGTT CGGAGTGGAC GATTCAAAAG TTGCAACCGT GTCGTTGGTG
ATCACCGCGA CGAAAGACGA AGGTCTGATC AAAGCGGATG ATTCTGAAAG CAGTTCGACT
CGTTACGCTC GGTATCTGCC GTTCTGGGCG TAA
 
Protein sequence
MITTPEQIDA WRAARSEHQN LEFKEAKNQF DNRKLFRYCV ALANEGGGHL LLGIEDVPPR 
KVVGTAAFND PVEMAAKIFQ TLNFRVEIEE VAHPDGRVLV FHIPSRPLGT AYQYEGAYLM
RAGEELVAMS EDRLRQIFSE GQPNWLSQPA KTDASDDEVI ALLDTQAYFD LMKLPYPTQR
TGVLERLASE GLIKGDSNGW EISNLAAILL AKRLDGFSHA LARKAPRVVI YDGVNKLKTK
DDKPGMRGYA VGFEALVDFV HSAAPQNRFI EEAVRKEVKM FPKQALRELI ANALVHQDFL
MTGASVMIEM YDDRVEISNP GLPPIQVERF IDEYRSRNER LADLMRRLGI CEEKGSGIDK
VISASEVFQL PAPDFRAGEL RTTAVLFAHQ DFPVMTKADR IRACYQHCCL QYVSGQRMSN
QSLRQRFGVD DSKVATVSLV ITATKDEGLI KADDSESSST RYARYLPFWA