Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2653 |
Symbol | |
ID | 9139365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3437575 |
End bp | 3438987 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | AAA-4 family protein |
Protein accession | YP_003630675 |
Protein GI | 296122897 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.348208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCACCA CTCCCGAACA AATCGACGCC TGGCGTGCGG CACGCTCGGA ACATCAAAAC CTCGAATTCA AAGAGGCCAA GAACCAATTC GATAACCGCA AGCTCTTCCG CTATTGCGTC GCTTTGGCCA ACGAAGGGGG CGGGCACTTG CTGCTGGGAA TCGAAGACGT TCCACCTCGC AAAGTGGTGG GAACGGCTGC ATTCAACGAT CCGGTGGAGA TGGCCGCGAA GATATTTCAA ACTTTGAACT TTCGAGTCGA AATCGAGGAA GTTGCTCATC CCGATGGCCG TGTTCTCGTG TTTCATATCC CCAGCCGGCC CTTGGGAACC GCCTATCAAT ACGAAGGTGC TTACCTGATG CGGGCGGGCG AAGAGCTTGT CGCGATGAGC GAAGATCGCT TGCGGCAAAT CTTTTCCGAA GGTCAACCTA ATTGGCTTTC ACAACCCGCA AAGACCGATG CCAGTGACGA TGAGGTCATT GCGTTGCTCG ACACGCAGGC TTACTTCGAC CTGATGAAGT TGCCCTATCC TACCCAACGA ACGGGCGTTC TGGAAAGATT GGCGAGCGAA GGATTGATCA AAGGCGACTC GAATGGGTGG GAGATTTCGA ACCTCGCTGC CATTCTTCTG GCGAAAAGAC TCGATGGGTT CTCGCACGCA CTGGCAAGGA AAGCGCCCCG TGTGGTGATC TACGACGGTG TGAACAAACT CAAGACAAAA GATGACAAAC CCGGAATGCG GGGCTACGCC GTAGGATTCG AGGCGTTAGT GGACTTTGTG CATTCGGCCG CACCGCAGAA TCGGTTCATC GAAGAAGCCG TGCGAAAAGA AGTCAAAATG TTCCCGAAGC AAGCCCTTCG CGAACTTATT GCGAATGCAC TTGTTCATCA AGACTTTCTG ATGACCGGAG CATCCGTGAT GATCGAGATG TACGACGATC GAGTGGAAAT CTCGAATCCC GGACTTCCAC CGATCCAGGT CGAGCGATTC ATTGATGAGT ATCGCTCCCG AAACGAACGC CTGGCCGATC TGATGCGTCG GCTGGGAATC TGCGAGGAGA AAGGCAGTGG CATCGACAAG GTGATCAGTG CGTCGGAAGT GTTTCAACTT CCCGCCCCAG ATTTTCGCGC CGGAGAGTTG CGAACCACGG CTGTCCTGTT CGCCCATCAA GATTTTCCGG TCATGACAAA GGCGGATCGC ATCCGAGCGT GCTATCAGCA CTGTTGCTTG CAGTACGTGA GCGGGCAGCG GATGTCAAAT CAGTCGCTCC GGCAGCGGTT CGGAGTGGAC GATTCAAAAG TTGCAACCGT GTCGTTGGTG ATCACCGCGA CGAAAGACGA AGGTCTGATC AAAGCGGATG ATTCTGAAAG CAGTTCGACT CGTTACGCTC GGTATCTGCC GTTCTGGGCG TAA
|
Protein sequence | MITTPEQIDA WRAARSEHQN LEFKEAKNQF DNRKLFRYCV ALANEGGGHL LLGIEDVPPR KVVGTAAFND PVEMAAKIFQ TLNFRVEIEE VAHPDGRVLV FHIPSRPLGT AYQYEGAYLM RAGEELVAMS EDRLRQIFSE GQPNWLSQPA KTDASDDEVI ALLDTQAYFD LMKLPYPTQR TGVLERLASE GLIKGDSNGW EISNLAAILL AKRLDGFSHA LARKAPRVVI YDGVNKLKTK DDKPGMRGYA VGFEALVDFV HSAAPQNRFI EEAVRKEVKM FPKQALRELI ANALVHQDFL MTGASVMIEM YDDRVEISNP GLPPIQVERF IDEYRSRNER LADLMRRLGI CEEKGSGIDK VISASEVFQL PAPDFRAGEL RTTAVLFAHQ DFPVMTKADR IRACYQHCCL QYVSGQRMSN QSLRQRFGVD DSKVATVSLV ITATKDEGLI KADDSESSST RYARYLPFWA
|
| |