Gene Plim_2607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2607 
Symbol 
ID9139318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp3383020 
End bp3383580 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein of unknown function DUF1568 
Protein accessionYP_003630630 
Protein GI296122852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.407993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTC CTCATCGGCG CAATTACAAC CTGCCGGGCC ATGCCCACGA ACTGACATTT 
TCATGCTATC TCGGTTTTCC ATTTCTCAAA TCGGAAAGAG CCTGTCGATG GCTGGCGGAA 
TCGCTTCACG AGGCACTTTG TCGGCATGAT TATTCACTCT GGGCCTATGT CTTGATGCCG 
GAACACGCTC ATGTCGTGGT GTGCCCAAGA CAGAAAGCCT ATCGCATTGA AGAGTTTCGA 
AAGTCCGTTA AGGAACCGGT TGCCCGTCAT GCGATTCGAT GGCTTGAACA TCATGCTGTC 
GAGTGGATTC CCAGGATCAC GCGAACTCGT GGCGCAAAAA CGGAGCGATT GTTCTGGCAG 
TCAGGTGGCG GGTATGACCG GAACATCACG GAAAGTAAAA CATTGTTACG AATGATCGAT 
TACATTCACC TCAATCCGGT ACGTCGTGGG CTTGTCGAGC GGGCGGCGGA CTGGGAATGG 
TCAAGTGCGG CTTGGCATGC AGAAGGAAAG CCGTCGCCCA TTCGAGTGGA TGCAATCCCG 
CCGGAATGGC TTTGTCAATG A
 
Protein sequence
MSIPHRRNYN LPGHAHELTF SCYLGFPFLK SERACRWLAE SLHEALCRHD YSLWAYVLMP 
EHAHVVVCPR QKAYRIEEFR KSVKEPVARH AIRWLEHHAV EWIPRITRTR GAKTERLFWQ 
SGGGYDRNIT ESKTLLRMID YIHLNPVRRG LVERAADWEW SSAAWHAEGK PSPIRVDAIP 
PEWLCQ