| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2559 |
|---|
| Symbol | |
|---|
| ID | 9139270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3328869 |
|---|
| End bp | 3330197 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | transcription termination factor NusA |
|---|
| Protein accession | YP_003630583 |
|---|
| Protein GI | 296122805 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.225701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCA ATGAAGTGCT GCGGATCGTG GATTCGATCC ATCGCGATAA GAGCATCGAC
AAGGAAATTG TCTTCGAAGG GGTGGAGCAA GCCATTCTTT CGGCTGCGCG GAAGCACTTT
GGTGAAGAAG AAGTCATCGA GGTTCATATT GATCGCACCA GCGGTCAACC AATGGTGAAA
ACCAATGGTC GCGAAATTGA CCGCGATGAA CTGGGTGATA TTCTCGGTCG CATCTCGGCT
CAAACTGCCA AGCAGGTTAT GATCCAGAAG ATTCGCGAAG CCGAGCGTGA CACGTTGTTC
GATGAATACG CCCAGTTGCG AGGGCAGATT GTCTCCGGGA CAGTGACTCG CAATGAGGGA
AGTGCCATTA CGGTCAACAT TGGCAAGGCG GAAGCGATTC TGCCTCGCAG TGAAATGATC
CCGGGTGAAT CGCATCGTCC GAATGAGCGA ATTCGTGCCG TGGTGCTGGA AGTCAAGAAG
ATGGGGCCTC GCGTTCGCGT GGTGCTGTCC CGAGCACATC CCGATTTTGT TCGCCGTTTG
CTTGAACTGG AAATTCCCGA GGTCAACGAG AGGATTATCG AGATCCGGTC TCTGGCTCGG
GAAGCTGGAT ATCGAACAAA AGTGGCGGTC TCCTGTGCCG ACAGCAATAT CGACCCGGTT
GGTGCCTGCG TGGGTGTGCG CGGTGCCCGC ATTCGCAATG TGGGCGAAGA GCTGGGTGGC
GAGCGGATTG AAGTTGTTCG CTGGAACGAT TCCCTCCAGG TGCTGGTCCC GAATGCGATG
CAGCCCTCGG AAGTGGAAGA TGTGATTCTT TGCCCGATGC TGGGCCGTGT GCTGGTGCTG
GTGCGGGATG ATCAGCTTTC TCTGGCGATT GGCAAACGCG GTCAGAATGT GCGTCTGGCT
TCGAAGCTGG TGGGCTGGGA CATCGACGTG ATGACTCGCG AAGAGCTGGA TCAGCAGCTT
GATCAGGCTG TGGTGGCCTA CTCGCAGATC CCGGGAGTTT CCGAGGAGCT GGCGGAAGGG
CTGGTATCGC AAGGTTTTCT GAGTTTTGAA GACCTGTCTG TCATCGAGCC CGACGAGCTG
ATGGAGATGG GCTCGTTAAC TCAAGAGCAG GCCGATGTGA TTGTTGAGTA TGCCGAACGC
GAAAGCGAGC GGATCGAGAA GGAGCAGGAT CTTCGTCGGG CGACCGAGAA GGCCGAACGG
CAATCTCAGG AGCGCGAGCA GCGCCGGGCC GATGAGGCCC GCGCCTCGAA TCCCGCTGTC
GAAAGCAAAC TGCCGCCCGC TGCGGACAAT GAAGCATCTG TTGAGGAGGC GGCCGGCAAT
AAATCGTAA
|
|---|
| Protein sequence | MNGNEVLRIV DSIHRDKSID KEIVFEGVEQ AILSAARKHF GEEEVIEVHI DRTSGQPMVK
TNGREIDRDE LGDILGRISA QTAKQVMIQK IREAERDTLF DEYAQLRGQI VSGTVTRNEG
SAITVNIGKA EAILPRSEMI PGESHRPNER IRAVVLEVKK MGPRVRVVLS RAHPDFVRRL
LELEIPEVNE RIIEIRSLAR EAGYRTKVAV SCADSNIDPV GACVGVRGAR IRNVGEELGG
ERIEVVRWND SLQVLVPNAM QPSEVEDVIL CPMLGRVLVL VRDDQLSLAI GKRGQNVRLA
SKLVGWDIDV MTREELDQQL DQAVVAYSQI PGVSEELAEG LVSQGFLSFE DLSVIEPDEL
MEMGSLTQEQ ADVIVEYAER ESERIEKEQD LRRATEKAER QSQEREQRRA DEARASNPAV
ESKLPPAADN EASVEEAAGN KS
|
|---|
| |