Gene Plim_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2546 
Symbol 
ID9139257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3307803 
End bp3308282 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630570 
Protein GI296122792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.395704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGTAT TCGCATTACG GAGTTGGGTC GGACAGATCA GTCCGGCCCG GTTCCCAACA 
GTGGTGTTCT CTGTTGTGGC CATCCTGAGT TCAATGTCCT GTGGCTGTGG CAGCAGCGTG
AGTGATCTGC CTCCTCTCGG CAAGGTTTCC GGAGTGGTGA CGCTCGATGG CAAACCGCTG
GCCAATGCGC GAGTTCAGTT TCAGCCGCCA GACAGTCGAG CCTCGGAAGG GATGACCGAC
GAGAACGGGG CCTACACTCT GAGATTCGAT CTTACAAACT ATGGCGCTAA AGTGGGGCCG
CATGTGGTTT CCGTTACCAC GCGTACGGAT GGCTATGCCA AACCTCCTCA AAATGGTCAA
GAGGGTGAGT GGGTCAAAGG ACAGCCCGAA TCTGTCCCAG CCAAGTACCT GAAACCCGGG
GCACTCACTG CGGAGGTAAA AGCGGGGAGC AACACGATCA ACTTTGAACT CAAGAACTGA
 
Protein sequence
MWVFALRSWV GQISPARFPT VVFSVVAILS SMSCGCGSSV SDLPPLGKVS GVVTLDGKPL 
ANARVQFQPP DSRASEGMTD ENGAYTLRFD LTNYGAKVGP HVVSVTTRTD GYAKPPQNGQ
EGEWVKGQPE SVPAKYLKPG ALTAEVKAGS NTINFELKN