Gene Plim_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2540 
Symbol 
ID9139251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp3302204 
End bp3302926 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content54% 
IMG OID 
ProductBioH protein, putative 
Protein accessionYP_003630564 
Protein GI296122786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.540694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGC TCCTCATGCC TGGCATGGAT GGTACAGGTG AACTCTTTAC GCCGTTGCTG 
AGTCATTTGC ACAACGATAT CGAAGCCGTC GTCTTCAGAT ATCCGTTCGA TCCCCGGATG 
GGTTATCCGG AACTGCTGAC TTTCGTGAAA CAACAACTCC CCGAAGATGA GCCTTACGTC 
GTTCTGGGGG AGTCCTTTTC CGGGCCATTG GCCATCCAGT TGGCTGCCAC CAGTCCTGCG 
GGGCTTTGTG GCGTCATTCT GTGTGCCAGC TTTTTGACCT CACCTGTGCG ATGGGTTCCC 
CGGTGGGCTG CATCGAGGGT TTCTTCATGG TGGTTTTCCC ATCCATTCCG AACACCACTG 
GCAATAATGT TTCTGGCAAA TGGAGCAGAG GCCGACTCGC GGCATTGGAT TCGAACCGTT 
TTGGATCAGG TTCCAGCAGA CATTCTGGCT GCCAGGTTAC GAGCAGTCCT GCGGGTTGAT 
GTGCGGCCTG AACTGCAGAA TGTTTCCGTG CCGATTCATT ACCTTCAGGC GACACAGGAT 
CGACTGGTCC CTGCATCCTG TTTATCGATC ATTCAGAAGT TAATGCCGAA GGTGACGTTC 
AGCCAAATTG CAGGGCCGCA CCTGTTGCTG CAGACTCAGC CGGCAGAAGC GGCCCGGCTC 
ATTTGTGCAA AAAGTCTTTC CTGGCAAGGG ACTCCGACAA ATCTGCAAAC TCATGCCGAT 
TGA
 
Protein sequence
MKLLLMPGMD GTGELFTPLL SHLHNDIEAV VFRYPFDPRM GYPELLTFVK QQLPEDEPYV 
VLGESFSGPL AIQLAATSPA GLCGVILCAS FLTSPVRWVP RWAASRVSSW WFSHPFRTPL 
AIMFLANGAE ADSRHWIRTV LDQVPADILA ARLRAVLRVD VRPELQNVSV PIHYLQATQD 
RLVPASCLSI IQKLMPKVTF SQIAGPHLLL QTQPAEAARL ICAKSLSWQG TPTNLQTHAD