Gene Plim_2533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2533 
Symbol 
ID9139244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3292705 
End bp3293640 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content55% 
IMG OID 
Productribonuclease BN 
Protein accessionYP_003630557 
Protein GI296122779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATGG TGAAGCGATT GAGTTTTCGA GCAGTGGTCC ACGTTTTTGT GGATGCCGGC 
CGTGAATGGC TGGCTCATAA GTGTCCGAGG CTGGGGGCTT CGCTCGCGTT TTATGCCATT
TTGTCACTGG CTCCATTGGC TGTGATTTCT GTCGGGCTGT TGAGCATGAT TGTCGGTGGG
GAAGTCGCTC GTGGCGAAGT GACCGACCAG ATGCGTGAAG TTGTCGGTGA GGAAGCGGCC
CAGATCGTCA GTTCAGTTGT GGCCAATACC CGCAAATCAA CCAACGGATT TATCGCGACC
ACGATTGGCA TCATTACTCT CGTGGTGGGA GCGATGGCGG TCTTCGTCGA ATTGCAGGAT
GCCCTCAATA CAATCTGGGA AGTCCCGCCT CATCGTACGA CAGGCTGGTG GCGGTTCATT
AAAGATCGAT TCCTGTCGTT TTTCATGATT TTCGGCATCG GGCTGCTGGT ACTGACTTCG
ATTGTGCTGA GCCTCATTGT GACCTCGTTA GGTAAAGTCG CGACCGATAT CGTGCCAGCC
ACACAATCGC TGCTGCAGTT TTCCGATCCT TCGATCAACT TTGTGGTTTT TGTGCTCCTC
TTTGCTGGTG TTTTTCGCTG GCTCCCGGAT GTCTCGCTCA CCTGGCGGGA TACGGCTCTC
GGTGCCGTCG TGACCGCGAT TCTTTTCCTT CTGGGCAAGA TCGCGATCTC GTTTTATCTC
CACCAGAGCG GTGTGGGGAA TGCTTATGGG GCCGCCGGTT CGATCGTTGT CTTCCTCGTG
TGGATGTACT ACTCGATGCA GGTGCTGCTC TTTGGGGCCG AACTGACGAG ATCGTTCTCG
CTCAACCTGG GAAGTGGTGC CGTGGTGGGC GGTGAACGCA TTCCCCGCCG TGGCAGCGAG
ACCGAATCGA TGCCCGCTGT GTCGTCTCCT TCCTGA
 
Protein sequence
MPMVKRLSFR AVVHVFVDAG REWLAHKCPR LGASLAFYAI LSLAPLAVIS VGLLSMIVGG 
EVARGEVTDQ MREVVGEEAA QIVSSVVANT RKSTNGFIAT TIGIITLVVG AMAVFVELQD
ALNTIWEVPP HRTTGWWRFI KDRFLSFFMI FGIGLLVLTS IVLSLIVTSL GKVATDIVPA
TQSLLQFSDP SINFVVFVLL FAGVFRWLPD VSLTWRDTAL GAVVTAILFL LGKIAISFYL
HQSGVGNAYG AAGSIVVFLV WMYYSMQVLL FGAELTRSFS LNLGSGAVVG GERIPRRGSE
TESMPAVSSP S