Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2514 |
Symbol | |
ID | 9139225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3273629 |
End bp | 3275149 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | carboxyl-terminal protease |
Protein accession | YP_003630539 |
Protein GI | 296122761 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTCAG CTCGGATGCA GTTTCTACCG CCGAATGCGG GATCACTTTC CCACACGGGC TGTGCCAGTC GGTGGTTACC AGGCGGCTGG TCTCGTGAGG TTTGGCTGGC TTTGTTCTGC GGCGCCGTTT TGCTGGCGAT GGCACCGACA TCGCTGGTGC TGGCAGACGA AGAAAAGGCC ACACCTCCGG ATGCTCGGGA GAAAGAATAT TACGAGTTGA TGAAACTGTT TGTCGATTCG TTTGAACAGG TCGAACGCAA CTATGTGAAA CCTGTGGATC GCAAGCAACT GCTGGAATCG GCCTTGAGGG GCATGCTGGC TGACCTGGAT CCGTATTCGT CTTACATCGA TTCATCGGGT CTGGCTGAAT TCACTCAGCA GGTGGAGCAG GAGTTTGGCG GGATCGGCAT TCAGGTTTCC CTCGATCCCA AAACGCGGCA GCTCGTCGTC ATGACACCAC TACCCGGGAC ACCGGCCTAT AAAGCTGGAA TTCGTGCCGG AGATCGAATT CTTTCGATCG CGGGAAAACC GACAGCCGAG TTCGCCGATG GTAAAGAACT CGAATCAGCC GTCGTGCTGA TGAAAGGTAA ACCCGGCGAG ATCGTGAAGC TGAGTGTGCT TCACGAGACC GAATCGACAC CCGTGGAGCT GGACGTCGAA CGGGCCATTA TTCGTACTCC TTCCGTGCTG GGTGATAAGT ACAACGAGGA CGGTAGCTGG TCGTTCTACC TCGATGGGCT CGACAAAGTG GCTTATGTCC GGCTCTCTCA GTTCGGCAGG AACAGTGCTG ACGAAATCAA ATCAACTCTG AAGGAGTTGG ATCAGCAGGG GATGAAGGGC TTGATTCTCG ATCTGCGATA CAACCCGGGC GGGCTGTTGA CGGCCGCCAC TGAAATTGCC GACATGTTTC TTGATAGTGG TGTGATTGTG AGCACTCGTG GTCGCAATAC CGAGGAACAG GTTTTCAAGG CAAAGAAGTC GGGGACGTTT CGCGATTTTC CTGTTGTTGT GCTGGTGAAC CGCTTCAGTG CTTCCGCCAG TGAGATTTTA AGTGCCGCAC TGCAGGATCA TGATCGAGCG ATCATTGTGG GTGAGAGATC GTGGGGGAAA GGGAGCGTAC AGAATGTCAT CAATGTCGAT GGTGGCAAGA GCGCACTCAA GCTGACCACA GCCAGCTATC ATCGCCCCAG TGGTAAGAAC ATTCATCGCT TCCCTAATTC GAAGGAAACC GATGAATGGG GTGTCAAACC CACCGAGGGC TATGAAGTGA AAATGACACC TGAGCAGATG CAGAAATATC TGGAATACCG TCGGCAGCGC GATGTCCTGC GGAAAGAAGC CGGAGCTTCG ACGTTTGATG ATCCTCAGTT GGCAAAGGCT GTGGAGTATC TGAAGTCCAA AATCTCGCCG GCTGCAGAAG CCAAGCCAGA AGAAGACAAA GATAAAGCCA AGGCTGAAAC ATCCCCGGCT GGGACTGCTC CTCAAGGTGA TTCTGCTTCC AAAGAAAATT CTGCCAGGTA G
|
Protein sequence | MFSARMQFLP PNAGSLSHTG CASRWLPGGW SREVWLALFC GAVLLAMAPT SLVLADEEKA TPPDAREKEY YELMKLFVDS FEQVERNYVK PVDRKQLLES ALRGMLADLD PYSSYIDSSG LAEFTQQVEQ EFGGIGIQVS LDPKTRQLVV MTPLPGTPAY KAGIRAGDRI LSIAGKPTAE FADGKELESA VVLMKGKPGE IVKLSVLHET ESTPVELDVE RAIIRTPSVL GDKYNEDGSW SFYLDGLDKV AYVRLSQFGR NSADEIKSTL KELDQQGMKG LILDLRYNPG GLLTAATEIA DMFLDSGVIV STRGRNTEEQ VFKAKKSGTF RDFPVVVLVN RFSASASEIL SAALQDHDRA IIVGERSWGK GSVQNVINVD GGKSALKLTT ASYHRPSGKN IHRFPNSKET DEWGVKPTEG YEVKMTPEQM QKYLEYRRQR DVLRKEAGAS TFDDPQLAKA VEYLKSKISP AAEAKPEEDK DKAKAETSPA GTAPQGDSAS KENSAR
|
| |