Gene Plim_2474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2474 
Symbol 
ID9139185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3226701 
End bp3229340 
Gene Length2640 bp 
Protein Length879 aa 
Translation table11 
GC content57% 
IMG OID 
ProductComEC/Rec2-related protein 
Protein accessionYP_003630499 
Protein GI296122721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.672876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGAAC AGCAGGCCAG ATCATTGAAC CCTGCGGAGG ATGAGCCCTC ATCGCGTCGG 
CCACCAGTGT TATGGGGCCG GGTTCCTGCT TTGGCAGCGG CAGGAGCTAT GGCCTCGGGG
ATCGTGCTGC AGGAAATCTT CGGCCTCGGA GTTTGTTTTG CTGGTGCTCT TGGTGTTCTC
GTTTGTCTGA TCGCCTGGCG AGTAAGCCTT CAGCGGAAGC ATGTCGCCTT TGGAGGTGAT
CTGTCTGGGT TTGGGCCCGG CTTTTTCGTC ACAGGTGCGC TGCTGGCACT CGCGAGTGCG
GCTGGCTTGT GGCACGAGGC GACATGGAAC TGGACGAGCC GGGATTCGTT GAGCCGCCTG
GCGGATTTGC GTTCGCAAGG TGTTTGCCTT GAAGGGATTT GTCGCTCGAC AGTTCTGGTT
GAGCGCATGC ACTCTTCGTT TGCGAAATCT TCGCCCGTCG CGATGGTGGC GTCAGGTTCT
ACACCTGCAG AAGCAACGAA CGATGGGCCA GGATCAGATC GGGTGGCGAA TGGAGAAGCT
GCCGGTCAAC GCGTGATTTC GCGATTCGTG TTCTCTGTTG AGAGGCTTGT TGTAGGGCCT
GAGCATCGCC AAGTAAGTGG AGATGTACAG GTCGATGTGG AAGGTGAAAC GCGCATTTTT
CAGCCGGGAG ATCGCCTGCG GATCTATGGC AAGTTAAGTC GTCCTGCACC GCCAATGAAT
CCGGGGGAGT TCAATTACGC GGACTGGCTT TACGCTCAGG GGATCGTCGG GCATGTGAGA
GTCAAACATC CTGAGGCGGT CGTACAGACC AGCGACAGGA TTCCGGTCAG CTGGAGGCTG
CGCCGCTGGA TGTCGTGGCT CCGTCAACGG GGAGAACGCA GTCTTGAGCA GGTGATTGTA
CGTTCGTCAC CCGAACTGGC CAGCAGCATA TTGCTGGGTG GACGCCAGCG TCTGGATGCC
GATCTGCGGG AATCGTTTGT ACGAAGCGGA TTGCTCCATA TTCTGGCCGT TTCGGGCATG
AATGTGGGGT TGGTGGTCTT ATTGATGATG ACCCTTTCCA AGGGGATTAT CCGGCATCCC
TGGAAATTGG CCGCCTGTGG ATTGGGAACG ATTGCGCTGT TTCTGATGCT GGCCGAGAAT
GATCCGCCTG TTGTAAGAGC GGCTTTCTTT GGAAGTGCCT GGATTCTCGG CAGCCGCTGG
GCAGGGGTGG TTGAACCTTT GAACGTCCTG GGGCTGACGG CGGTGACTTT GATGATTCTG
AGCCCGCACG ACTTGTTGCA GTTAGGTTTT CAACTTTCGT TTCTGGCGGT GGCCACGCTG
CTGATTGTGG CACGCACAAT GGGAAAACCA CAGGTCATTC AAAGTCAGTC TGAAGGGGCC
ATGGCTGCTT CCGGCTGGCG AGCGATCCGG GGGCATAGGT GGCTGGCAAT CCTTTGGCAG
TTGATGATTG CCACCTTCGT GATCTGGTGT CTGACGACAC CATTGATTGC CGCGACCTCG
GGAGTGATCT CGCCTGTCGG TCTGATTCTA AATATCGCTC TGGCACCGCT GGTGCCCATT
ATTCTCTGGA GTGGCTATAT CACGTTGCTC CTGGGGATGA TTCATCCGTG GCTGGCGATC
CCTTCGGGAG GGATTTTCGA CTGGTCACTC TATTGGCTGA TCGACGTGGT CGATCAGGCG
GCTGGATGGA GATACGGTCA TTTTGTGCTT TCACCACTCC CAGTGGAATA TGCTTTGATC
TTTTACTCAG CCGTGGCGGG CATGCTGCTC TTCCGGGTGC ATCGAGTTCG CGTGGTCATG
CTGACGCTGG GCCTGGGAGT GATCTGGCTG GCGGTAGGAT ACTGGCCCCA GGAGCGGCCT
TTGCGTTTGA CTTTCCTGTC GGTGGGGCAT GGATTGGCCG TACTGGTCGA GACTCCCGAC
CAGAAAATGT GGCTATATGA TGCGGGTTCT TTAGGGCAGG ATCGACGGGC CGCACGAGTC
ATTGGCCAGG CCATTCGACA TTACGGATCG ATCCAGCTCG ATGCTGTGAC GATCTCTCAT
GCCGATGCTG ATCACGCCAA TGCCATTCCT CGATTGACGC GCGATGTGAC CATTCGCTGG
CTGGGAATGC CGAAAAGTGC GGCCGATCCT GACCAGCGAG TGATTGGTGA AGCTGTGGCG
GCTGTGGCTT CGCAAGGGGG CGTCATTCGA CTGGTGCAAG GTGGGCAGAA GTTCTGTCTG
TCTCAAGATG TGGAGATCGA GTTTTTGTGG CCTCTATTCA AGAAAGAGGA GACGCTGCTT
TCACGAAAGA CGACCGATAA TTCGGAAAGT CTGGTGGCGA GAATTACCTA CCAGAACCGG
GTGATTCTGC TGACCGGCGA TCTCGAAGGC GAGGGGCTTG TCCACTTGCT GGAGACGCCA
CCAGGCATGG TCGATGTGCT GCTCGCTCCG CATCATGGGG GAAAACGCAG CAATGTCGCT
GCATTAAACC ACTGGGCCCG ACCACAGCAT GTGATCTCCA GTCAGGGGCC CGGCGATGTG
ACGACAGGCC TCGAGCAGAC ATTTGTCGAT TCGAAGATCT GGGTTACATC CAAGCAGGGG
GCGATTGTGG TGGAGATTGA CCGCGCGGGA GTTGTGACCG TTCGGTCTCA GCTGCCTTGA
 
Protein sequence
MIEQQARSLN PAEDEPSSRR PPVLWGRVPA LAAAGAMASG IVLQEIFGLG VCFAGALGVL 
VCLIAWRVSL QRKHVAFGGD LSGFGPGFFV TGALLALASA AGLWHEATWN WTSRDSLSRL
ADLRSQGVCL EGICRSTVLV ERMHSSFAKS SPVAMVASGS TPAEATNDGP GSDRVANGEA
AGQRVISRFV FSVERLVVGP EHRQVSGDVQ VDVEGETRIF QPGDRLRIYG KLSRPAPPMN
PGEFNYADWL YAQGIVGHVR VKHPEAVVQT SDRIPVSWRL RRWMSWLRQR GERSLEQVIV
RSSPELASSI LLGGRQRLDA DLRESFVRSG LLHILAVSGM NVGLVVLLMM TLSKGIIRHP
WKLAACGLGT IALFLMLAEN DPPVVRAAFF GSAWILGSRW AGVVEPLNVL GLTAVTLMIL
SPHDLLQLGF QLSFLAVATL LIVARTMGKP QVIQSQSEGA MAASGWRAIR GHRWLAILWQ
LMIATFVIWC LTTPLIAATS GVISPVGLIL NIALAPLVPI ILWSGYITLL LGMIHPWLAI
PSGGIFDWSL YWLIDVVDQA AGWRYGHFVL SPLPVEYALI FYSAVAGMLL FRVHRVRVVM
LTLGLGVIWL AVGYWPQERP LRLTFLSVGH GLAVLVETPD QKMWLYDAGS LGQDRRAARV
IGQAIRHYGS IQLDAVTISH ADADHANAIP RLTRDVTIRW LGMPKSAADP DQRVIGEAVA
AVASQGGVIR LVQGGQKFCL SQDVEIEFLW PLFKKEETLL SRKTTDNSES LVARITYQNR
VILLTGDLEG EGLVHLLETP PGMVDVLLAP HHGGKRSNVA ALNHWARPQH VISSQGPGDV
TTGLEQTFVD SKIWVTSKQG AIVVEIDRAG VVTVRSQLP