More than 300 homologs were found in PanDaTox collection
for query gene Plim_2474 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014148  Plim_2474  ComEC/Rec2-related protein  100 
 
 
879 aa  1757    Planctomyces limnophilus DSM 3776  Bacteria  normal  0.672876  n/a   
 
 
-
 
NC_013385  Adeg_1483  DNA internalization-related competence protein ComEC/Rec2  27.99 
 
 
791 aa  201  6e-50  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2510  DNA internalization-related competence protein ComEC/Rec2  24.34 
 
 
794 aa  180  1e-43  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1595  DNA internalization-related competence protein ComEC/Rec2  25.89 
 
 
761 aa  172  3e-41  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4445  DNA internalization-related competence protein ComEC/Rec2  23.87 
 
 
773 aa  170  1e-40  Bacillus cereus B4264  Bacteria  normal  0.0495736  n/a   
 
 
-
 
NC_003909  BCE_4406  DNA internalization-related competence protein ComEC/Rec2  22.67 
 
 
773 aa  169  2.9999999999999998e-40  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4458  DNA internalization-related competence protein ComEC/Rec2  23.1 
 
 
773 aa  167  5.9999999999999996e-40  Bacillus cereus AH187  Bacteria  hitchhiker  0.00283851  n/a   
 
 
-
 
NC_011772  BCG9842_B0792  DNA internalization-related competence protein ComEC/Rec2  24.24 
 
 
773 aa  164  5.0000000000000005e-39  Bacillus cereus G9842  Bacteria  normal  0.92497  hitchhiker  0.0000000434572 
 
 
-
 
NC_011899  Hore_12920  DNA internalization-related competence protein ComEC/Rec2  23.07 
 
 
775 aa  162  4e-38  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000012809  n/a   
 
 
-
 
NC_010424  Daud_2070  DNA internalization-related competence protein ComEC/Rec2  26.36 
 
 
818 aa  160  1e-37  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4176  DNA internalization-related competence protein ComEC/Rec2  24.13 
 
 
773 aa  159  2e-37  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0606  DNA internalization-related competence protein ComEC/Rec2  22.98 
 
 
778 aa  156  2e-36  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4071  DNA internalization-related competence protein  23.88 
 
 
773 aa  155  2e-36  Bacillus cereus E33L  Bacteria  normal  0.499181  n/a   
 
 
-
 
NC_005957  BT9727_4061  DNA internalization-related competence protein ComEC/Rec2  24.48 
 
 
773 aa  154  8e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4347  DNA internalization-related competence protein ComEC/Rec2  24.48 
 
 
654 aa  153  1e-35  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000320337 
 
 
-
 
NC_009674  Bcer98_3051  DNA internalization-related competence protein ComEC/Rec2  23.73 
 
 
780 aa  153  1e-35  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.755952  n/a   
 
 
-
 
NC_010320  Teth514_2092  DNA internalization-related competence protein ComEC/Rec2  23.86 
 
 
757 aa  151  5e-35  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000797686  n/a   
 
 
-
 
NC_009483  Gura_1885  DNA internalization-related competence protein ComEC/Rec2  25.43 
 
 
797 aa  150  1.0000000000000001e-34  Geobacter uraniireducens Rf4  Bacteria  normal  0.372915  n/a   
 
 
-
 
NC_005945  BAS4223  DNA internalization-related competence protein ComEC/Rec2  24.52 
 
 
772 aa  148  5e-34  Bacillus anthracis str. Sterne  Bacteria  normal  0.396559  n/a   
 
 
-
 
NC_007530  GBAA_4551  DNA internalization-related competence protein ComEC/Rec2  24.52 
 
 
772 aa  148  5e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.76471  n/a   
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  27.43 
 
 
839 aa  146  1e-33  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_012793  GWCH70_2449  DNA internalization-related competence protein ComEC/Rec2  23.99 
 
 
759 aa  140  7e-32  Geobacillus sp. WCH70  Bacteria  normal  0.327807  n/a   
 
 
-
 
NC_011898  Ccel_1955  DNA internalization-related competence protein ComEC/Rec2  22.57 
 
 
786 aa  134  1.0000000000000001e-29  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1657  DNA internalization-related competence protein ComEC/Rec2  25.07 
 
 
771 aa  128  4.0000000000000003e-28  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  25.54 
 
 
841 aa  125  3e-27  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1759  DNA internalization-related competence protein ComEC/Rec2  25.97 
 
 
814 aa  124  7e-27  Geobacter lovleyi SZ  Bacteria  normal  0.0611654  n/a   
 
 
-
 
NC_012034  Athe_1921  DNA internalization-related competence protein ComEC/Rec2  23.78 
 
 
752 aa  124  7e-27  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00848355  n/a   
 
 
-
 
NC_008576  Mmc1_0600  DNA internalization-related competence protein ComEC/Rec2  25.77 
 
 
815 aa  124  7e-27  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.404851 
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  26.7 
 
 
772 aa  123  1.9999999999999998e-26  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_013216  Dtox_3303  DNA internalization-related competence protein ComEC/Rec2  25.62 
 
 
789 aa  122  1.9999999999999998e-26  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.78547  normal 
 
 
-
 
NC_009457  VC0395_A1470  ComEC/rec2 family protein  25.78 
 
 
752 aa  121  4.9999999999999996e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1107  ComEC/Rec2-related protein  24.92 
 
 
755 aa  118  5e-25  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0140  DNA internalization-related competence protein ComEC/Rec2  23.03 
 
 
868 aa  116  2.0000000000000002e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  hitchhiker  0.0038467 
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  24.06 
 
 
762 aa  115  2.0000000000000002e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_3864  ComEC/Rec2-related protein  31.73 
 
 
816 aa  115  4.0000000000000004e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0842748 
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  26.67 
 
 
835 aa  114  9e-24  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1379  DNA internalization-related competence protein ComEC/Rec2  25.64 
 
 
808 aa  113  1.0000000000000001e-23  Pelobacter propionicus DSM 2379  Bacteria  normal  0.011467  n/a   
 
 
-
 
NC_009455  DehaBAV1_0023  DNA internalization-related competence protein ComEC/Rec2  25 
 
 
796 aa  112  2.0000000000000002e-23  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1716  DNA internalization-related competence protein ComEC/Rec2  24.57 
 
 
846 aa  112  3e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.116279  normal  0.782454 
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  25.41 
 
 
851 aa  112  4.0000000000000004e-23  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_007498  Pcar_1043  DNA internalization-related competence protein ComEC/Rec2  24.43 
 
 
785 aa  107  9e-22  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  26.13 
 
 
800 aa  107  1e-21  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_002936  DET0024  DNA internalization-related competence protein ComEC/Rec2  23.63 
 
 
795 aa  104  7e-21  Dehalococcoides ethenogenes 195  Bacteria  normal  0.0591884  n/a   
 
 
-
 
NC_009767  Rcas_3433  ComEC/Rec2-related protein  28.07 
 
 
494 aa  104  7e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.591181  normal  0.179393 
 
 
-
 
NC_013552  DhcVS_23  DNA internalization competence protein  23.02 
 
 
795 aa  102  2e-20  Dehalococcoides sp. VS  Bacteria  normal  0.0107142  n/a   
 
 
-
 
NC_009943  Dole_0767  DNA internalization-related competence protein ComEC/Rec2  23.39 
 
 
840 aa  102  3e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1002  DNA internalization-related competence protein ComEC/Rec2  24.68 
 
 
749 aa  100  8e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010718  Nther_1173  DNA internalization-related competence protein ComEC/Rec2  23.39 
 
 
750 aa  100  9e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00434485  hitchhiker  0.000212306 
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  25.25 
 
 
839 aa  100  1e-19  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_1174  metallo-beta-lactamase superfamily hydrolase  21.35 
 
 
761 aa  99.4  2e-19  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.0000121236  hitchhiker  0.000000673843 
 
 
-
 
NC_008025  Dgeo_1579  DNA internalization-related competence protein ComEC/Rec2  26.7 
 
 
883 aa  99  3e-19  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0482933  normal 
 
 
-
 
NC_007614  Nmul_A2506  DNA internalization-related competence protein ComEC/Rec2  23.61 
 
 
766 aa  99  4e-19  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  22.69 
 
 
802 aa  98.2  5e-19  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_013223  Dret_0764  DNA internalization-related competence protein ComEC/Rec2  25.95 
 
 
811 aa  98.2  6e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.804759 
 
 
-
 
NC_009523  RoseRS_1609  ComEC/Rec2-related protein  27.61 
 
 
546 aa  97.8  7e-19  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1806  DNA internalization-related competence protein ComEC/Rec2  26.49 
 
 
804 aa  97.4  9e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1343  ComEC/Rec2-related protein  31.54 
 
 
503 aa  97.1  1e-18  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000547929 
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  24.59 
 
 
801 aa  96.7  2e-18  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003988  predicted hydrolase of the metallo-beta-lactamase superfamily  25.21 
 
 
752 aa  96.3  2e-18  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4338  ComEC/Rec2-related protein  24.58 
 
 
798 aa  95.5  4e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_04815  competence protein  27.31 
 
 
679 aa  95.1  5e-18  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_1070  ComEC/Rec2-related protein  29 
 
 
593 aa  94  1e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.928875  normal  0.121556 
 
 
-
 
NC_009972  Haur_3646  ComEC/Rec2-related protein  26.79 
 
 
493 aa  92.4  3e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  25.42 
 
 
770 aa  92  4e-17  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  24.68 
 
 
878 aa  92.4  4e-17  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_006368  lpp0680  hypothetical protein  22.1 
 
 
735 aa  91.7  5e-17  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  23.2 
 
 
784 aa  91.7  5e-17  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2538  ComEC/Rec2-related protein  27.49 
 
 
604 aa  91.7  6e-17  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl0663  hypothetical protein  22.22 
 
 
735 aa  90.9  9e-17  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_1920  ComEC/Rec2-related protein  27.95 
 
 
708 aa  90.5  1e-16  Spirosoma linguale DSM 74  Bacteria  normal  0.112953  normal  0.839642 
 
 
-
 
NC_011313  VSAL_II0736  putative competence-related protein  23.18 
 
 
768 aa  90.5  1e-16  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  25.93 
 
 
840 aa  90.1  1e-16  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_2973  competence protein  29.92 
 
 
626 aa  89.7  2e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.530414  normal  0.293948 
 
 
-
 
NC_007963  Csal_1585  DNA internalization-related competence protein ComEC/Rec2  26.15 
 
 
758 aa  89.4  3e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.882312  n/a   
 
 
-
 
NC_010644  Emin_1470  ComEC/Rec2-related protein  25.91 
 
 
609 aa  89  4e-16  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  24.37 
 
 
763 aa  88.6  5e-16  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  24.28 
 
 
778 aa  88.2  6e-16  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_0848  ComEC/Rec2-related protein  23.76 
 
 
689 aa  87  0.000000000000001  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  23.17 
 
 
847 aa  87.4  0.000000000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_012917  PC1_1768  hypothetical protein  23.04 
 
 
763 aa  87.4  0.000000000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.44185  n/a   
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  26.36 
 
 
833 aa  87.4  0.000000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_1203  DNA internalization-related competence protein ComEC/Rec2  26.01 
 
 
770 aa  87  0.000000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  25.04 
 
 
822 aa  86.3  0.000000000000002  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  24.86 
 
 
825 aa  85.9  0.000000000000003  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01534  hypothetical protein  25.85 
 
 
752 aa  86.3  0.000000000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_14040  beta-lactamase domain protein  28.68 
 
 
406 aa  85.1  0.000000000000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0924  comEC/Rec2-like protein  24.22 
 
 
792 aa  85.1  0.000000000000005  'Nostoc azollae' 0708  Bacteria  normal  0.158151  n/a   
 
 
-
 
NC_013132  Cpin_0927  ComEC/Rec2-related protein  24.01 
 
 
694 aa  85.1  0.000000000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  25.24 
 
 
747 aa  84  0.00000000000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  26.96 
 
 
819 aa  84.3  0.00000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  30.63 
 
 
840 aa  83.2  0.00000000000002  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_013161  Cyan8802_4131  ComEC/Rec2-related protein  26.83 
 
 
748 aa  83.2  0.00000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3836  ComEC/Rec2-related protein  27.01 
 
 
769 aa  82.4  0.00000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3098  DNA internalization-related competence protein ComEC/Rec2  25.54 
 
 
811 aa  82  0.00000000000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1744  DNA internalization-related competence protein ComEC/Rec2  24.93 
 
 
806 aa  81.6  0.00000000000005  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4317  ComEC/Rec2-related protein  25.52 
 
 
872 aa  81.3  0.00000000000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1887  DNA internalization-related competence protein ComEC/Rec2  26.18 
 
 
772 aa  80.9  0.00000000000009  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1395  DNA internalization-related competence protein ComEC/Rec2  23.38 
 
 
799 aa  80.5  0.0000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.751306  normal 
 
 
-
 
NC_008709  Ping_0899  DNA internalization-related competence protein ComEC/Rec2  25.66 
 
 
798 aa  80.5  0.0000000000001  Psychromonas ingrahamii 37  Bacteria  normal  0.383263  normal  0.740662 
 
 
-
 
NC_008062  Bcen_5966  DNA internalization-related competence protein ComEC/Rec2  31.68 
 
 
829 aa  80.5  0.0000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.814009  n/a   
 
 
-
 
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