| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2449 |
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| Symbol | |
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| ID | 9139160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 3194944 |
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| End bp | 3197370 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | ribonuclease R |
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| Protein accession | YP_003630474 |
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| Protein GI | 296122696 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.162395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACT GGCAACCACA AATCTTGAGT GTCGTCACGC ACCCAGCGTA CACACCACTC
AAATGGCAGC AGTTGGCCAA AGAAGTCGGC GCCCAGAAAC ACGACTGGAC GAAGTTCCGC
CGCTCGCTCG AAGAACTCAT CGAAGGCAAG CGGCTGCATC GCACTTCCGG CGGGCTGATC
AAAGTCCCTG TCGCACGCGA GCACATCATC GGCACCATCA AACGCGCAGC GCGCGGCCAC
GCCTGGTTCA CTCCCGAATC ACTCGCCAAT CAACCGCATA TCGAACCTTA TACAGTTGCT
GCCGAAGATG CCGGCTCGGC GCTCACAGGC GATAAAGTCT CAGCCATCAT CCTCAAAAAG
CGGGGCCCCA ATGGAAAGAT CGCCGTCCGC GTGATCGATA TCCTCGAACG TGCCACCACT
CAGTTCGTGG GCGAATACCA CGAATCCCGC GGCAAAGGAT ATGTCACTGT CGATAACAGC
CGCTTTGAAC GGCCAATCGA TGTCGGCGAC CCCGGTGCGA AAGGTGTCCG CCCTGGTGAT
CAGGTCGTTA TCGAAATGGT GCACTTCCCC GAGTTTTCAA CTCCGGGAGA AGCGGTGCTG
CTCAAAGTCC TGGGGAAACG GGGTGAACCG GGCGTCGATT TACAATCGAT CATCTATGAG
TTCGGCCTGC CTGATGAATT TCCCGAAAGT GTGCTCGAAG AATCGCGACT GCAGGCACAG
CTTTTCTCCG AAGACGATAT CGGTGACCGC CTTGATCTTC GCGACGAACT GATCATTACC
ATCGATCCCC TCACAGCCCG GGATTTTGAC GACGCCATTT CTCTCAAGCG GCACGAAGAT
GGTTCGTGGA CTCTCGGCGT CCACATTGCC GATGTGGCTC ACTTTGTGCG GCCCGGCACA
GAACTCGACA AAGAGGCCAT TCGACGAGGC AACAGCGTTT ACCTTCCCGG CAAAGTGCTT
CCCATGCTCC CCGAAGTGCT CTCCAATGCA CTCGCGAGCC TTCAGCAGGA TAAAGTCCGC
TTTGTCAAAA GTGCTTTCAT CGAATACTCC CCTGATGGCA TGGTGAAGCA CACCAGCTTT
GCCAATGCCG CCATTAAGGT CCGCAGACGC TTCGCTTACG AACAGGTCAT GCCACTTTTG
TTAAACCGGC AATCTCCGGG CGAACATCCG GCTCCCGAAG GTGAAACAGT TCCCGAAGAA
ATCTGCCAGC TTCTCGAACG CATGTACGAA CTGGCCATGA TTCTTCGCAA ACGCCGCTTT
TCTCGCGGTG CCCTCGAACT CTCGCTCGGC GAAGTCGAAC TCGATTGCAA TGACGATGGC
AATGTCACCG GGGCACACCG AGCTCTGCAC GACGCCAGCC ACCAGATTAT TGAAGAGTTT
ATGCTGGCGG CCAACGTCGC TGTGGCCGAA GAATTTGATC GCCGCGGCTG GTTTTTCCTT
CGCCGGGTTC ACGACAGCCC CGATGAACTC CGCATGCAGA ACTTTGCCAA ATTCGTCGCC
ACTCTCGGTT ACGATTTACC GCGCGCACAG GATCGTCAGG CGATTCAGGC ACTGCTTAAT
GAAGTCGCCG GCCAGCCTGA GGCTTTCCCG CTGAATTACG CACTTTTGCG GAGTCTGAAG
CAGGCCGAAT ACTCTCCCGA AAAGATTGGC CATTACGCCC TGGCAGTCGA CAATTACGCC
CACTTTACCA GTCCCATCCG CCGCTATCCC GATCTCACCA TTCACCGCCT GCTGGAACAT
GTGATCGCCG ATGCATCCTT CACGCACAGT GTTCCAGCCG CCGAGTCATT AAACACAGCG
AGTGATCGCA AAAAGTCGAA ATCTTCACGA GCCGATCTTC TCTCGGAAGC CGACTTGAGA
CAGTTGGGCA AGCAATGCTC ACTCACCGAA CGTCGAGCCG AGAAAGCCGA GCGGGAACTG
ATAAAAATCC GCCTCATTCG TTATCTGGCG GACAAGGTGG GCCTCGAACT CAACGCGACA
ATTACCGGCG TGGAACGCTT TGGCCTCTTC TGCCAGGGAA TTGAACTTCC CGCAGAAGGC
CTTGTGCATC TTTCCGACCT GCCTGGTGAT TACTACGACG TCGATCAGAT TGCCCATGCC
GTCATTGGTC GGCGATCTGG CCGGGTATTC CGCCTGGGTG ATCCTGTGCG TGTTCAGGTA
TCCAGTGTTG ATCCTGCGAA GCGAGAACTC AACTTTCGCA TTGTCGGGCG ATCCGGCCAG
GATGATACTC TTTCAGAAGG TGAATTCTCT CGGGAAACTC CCGGGGATGA TCGATCTCGC
TCCGCTTCCG ATAAATCATC CAGCAGTCCC AGACGACGAT CCCAACCACG TTTTCCGGGA
GACCGCTCAA ACGCTTCTGC CAAGGGTGGG TTCCGCCAGA AAAAACAGAG CTCCAGCCCC
AAAAAAACTC GCAAGAAGCC TCGCTGA
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| Protein sequence | MADWQPQILS VVTHPAYTPL KWQQLAKEVG AQKHDWTKFR RSLEELIEGK RLHRTSGGLI
KVPVAREHII GTIKRAARGH AWFTPESLAN QPHIEPYTVA AEDAGSALTG DKVSAIILKK
RGPNGKIAVR VIDILERATT QFVGEYHESR GKGYVTVDNS RFERPIDVGD PGAKGVRPGD
QVVIEMVHFP EFSTPGEAVL LKVLGKRGEP GVDLQSIIYE FGLPDEFPES VLEESRLQAQ
LFSEDDIGDR LDLRDELIIT IDPLTARDFD DAISLKRHED GSWTLGVHIA DVAHFVRPGT
ELDKEAIRRG NSVYLPGKVL PMLPEVLSNA LASLQQDKVR FVKSAFIEYS PDGMVKHTSF
ANAAIKVRRR FAYEQVMPLL LNRQSPGEHP APEGETVPEE ICQLLERMYE LAMILRKRRF
SRGALELSLG EVELDCNDDG NVTGAHRALH DASHQIIEEF MLAANVAVAE EFDRRGWFFL
RRVHDSPDEL RMQNFAKFVA TLGYDLPRAQ DRQAIQALLN EVAGQPEAFP LNYALLRSLK
QAEYSPEKIG HYALAVDNYA HFTSPIRRYP DLTIHRLLEH VIADASFTHS VPAAESLNTA
SDRKKSKSSR ADLLSEADLR QLGKQCSLTE RRAEKAEREL IKIRLIRYLA DKVGLELNAT
ITGVERFGLF CQGIELPAEG LVHLSDLPGD YYDVDQIAHA VIGRRSGRVF RLGDPVRVQV
SSVDPAKREL NFRIVGRSGQ DDTLSEGEFS RETPGDDRSR SASDKSSSSP RRRSQPRFPG
DRSNASAKGG FRQKKQSSSP KKTRKKPR
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