| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2436 |
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| Symbol | |
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| ID | 9139147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 3176387 |
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| End bp | 3179071 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | O-antigen polymerase |
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| Protein accession | YP_003630461 |
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| Protein GI | 296122683 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCTT TGCGAACGAT GGCGTTTTCG ATCCAGAGTC TGTTGTTCGG GGAGCAGGCG
ATTCCTGTTC GCTCAGATCT GGAAAAGGGG CGTCCTCCGG GATGGTTGTG GATGTCTGCG
AGAGGAAAGA AACCTGTTGT TGAAACCCGG CGGGCTGGAA CTTCGACAGG TCAGCGAATG
GTGCAGGATG CGGGTGGGCT GGCTGAGCCT TCGCGATCGC AAGAGCGCGT GGCGGGTTGG
CTGGTCGTGC TGCTCGCCAG TCTTTTTTTT GCGAGGTTCT GGACACCTCC TGAAGCCGCA
GTGATGGGGG AATCCCTCTG GCTGGCGATT CTGTCGATGG CCACATCGGC GCTGCTGCTG
ATCCTGTTGC CTAAAACAGA GCTTGCTTCG CGTGCCTGGC GTTCAGGGTT TGTCTGGGGA
TTGCTGCTGC TGACTGCTGG TCAGGTGGCT GGGACAATTC ACGTCTGGCT GGCTCAGGGA
GATCGACGAG CGGCTGCCAA TCTGCTGATT GAGTTTTTTT CTCTGGCCAT GGGAGCCTGC
GTGCTGTGGC GTCTGGCACC TCGATTGCCG GAACGACCGG GCCACGTGAT CAGCCTGAGT
GCGATCTGGC CGTTTGTGAT CACGACATTA CTGTCAATGT CTGTACTGGG GCTGTATCAG
CATGAGATTG GCCTGCCTGC GATCTCCGGT CGATATATCA AAGCGATACA GGAACTGGAT
CGACTGGAGG GTCTGCAGGA GCGATCCGCA GAAGATGAGT CAAAGATTTC ACAGCTCAGG
CAAAAGCTGG AAAGCGATGG CATCCCGACA GAACTGCATG CTCGCAGAGC GTTCTTTCAA
CGATTGACCA GCAGTGAACC TTATGGCTTT TGCGCTTTGG CGAATACATT TGCGGCTATC
CTACTGGTTC TGCTGGTATT GAGTCTGTTT GCCTGGCCAG AGGTGACTCA GCAGCGCACG
ATGTGGTCCT GGCCAGATCT TTCCCGCCCG TTCACCTGGA TTCTGCTGTC GGCATGGCTA
TTGGGAGGCT GGACCTTGCT GCTGACGAAA TCCCGTACGG CAGTGCTGGC ACTGGCTGTC
ACGATGCTGC TGCTGGCTGT GCGGCCACTT GTCAGCCAGT GGAAAGCTGT GGGCGAGCTG
CGTGTTTCGT CAAGATCGTG GTTGTGGATC TTCGGTGCTG GAACAGGATC CATGCTTCTG
CTGGTCGGCC TGGTGGTCTG GAGAGGCGGG CTGGATCTGG AGGTGATCAC AGAAGCCCCG
AAATCACTGC GATATCGGCT GGAATACTGG GTCGCGACAT TGCAGATGCT GGCAGATCAC
CCCTGGTTGG GTGTGGGCCC CGGAAACTTT CGCAGCGTTT ATTTGTCGTA CAAACTCCCG
AGTTCGAGCG AAGAGATCGC TGACCCTCAT AACATGGTTC TTGAAGCGTG GAGTTCGGGA
GGAGTTTTGT CGCTCGCGGG GTTGCTGGTG CTCGCGGGAA CTGGGTTATT CGCTTTGGGG
AAAGGGTTAT TGAACTCGTC GCCAGTGGTG AATGATCAAA CTTCGTCGGA AAGACTTTTC
ATTCAGTATT CTCGAGCTAT CCACCTTCCT TCAAATTGGC CACTGTGGGC TGGTGCTGGC
AGTCTGGCGA TTGCCTGGTG GGGCCGGTTT CTGCTGGATG GGGTCTTTGA CGATGCGCTC
ATTGTGTTTG GTGTCTTCTG GACTGGGCTG TATCTGATCA TCGACCGGTG GCGATTGAAC
TCATCGATGA AGTCAGAGAC GGCCGATGAA TCGCCTGCTG CCCCGCAGGA ATTGAGGGCC
GATCGGGATG CTCGTGGCTT CGCTCACAGT TGGGGAGATC TGGCATTTCC AGCTGCGGCG
TTCGCTCTGG GAGTGAATCT CCTGGCGGCT GGTGGGTTTG GCATGGCGGC CATCCTGGGA
TTATGGCTGC TGTTGATTAC TTTATCGACA TGGCCGGTAG GTGCCGTTGT TACACAGATG
AGAGAACCCG GAGAATTTCA GGCTGTCAAA GCTGGTTTCG GCGAGGCTCT GATCTCGTCG
ATTTTCAGGT GGGGAAGTCG ATTACTCCCC GGGGCGATGG TGCTGGTGAT GGTCCTTTCG
ATCTGGGGAG CATGGCCAGT CTGGATGGTC TCACAGGGGC GCATCCAGAT GTCAGCTCGA
CCAGCCTCGA CGCGAGGTGC TGCCATACGG GAAATGGTGA AATTGGCTGA ATTGGATGAG
TGGTCTCCCA GCCTGGCCGA GACGGCTGGC ATGGCGTGGT TTTCGAATGC CGAAAGTTCG
ACGGATTGGG CGAACGGTGA AAAATGGATG AAATCTGCCA GTCAACGCGA TTTTCACAGT
TACCGGCCTC ATGAGCAGTT GGCGCGTGCC TATTTTGAAA GAGCTGTGAG CAGTCCTGCT
GAGCGACAAA ATTTTGCCGA GAAGGCTGTG GAATCTTTTG AGGAAGCGAA TCGCAGATAT
CGCAGTTCGA GTCGACTTCT GGCTGGGGCT GCGGAAGCGT TGGCATTGGC AGGGAAGCGA
AAAGAGGCCT CAATTGAAGC GAATCTGGCT TTGAAGCAGA ATGAATTGAA TCGGCAATTG
GGCCACTCGG ATCGTGTGCT TCCTGAAGAA GTTGTCGAGC GACTCAAGCG ACTGCAAGCA
GAAAAGCTGG ATGAAGATCC TTTGAACAAT GGGCGAGTCC AGTGA
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| Protein sequence | MPSLRTMAFS IQSLLFGEQA IPVRSDLEKG RPPGWLWMSA RGKKPVVETR RAGTSTGQRM
VQDAGGLAEP SRSQERVAGW LVVLLASLFF ARFWTPPEAA VMGESLWLAI LSMATSALLL
ILLPKTELAS RAWRSGFVWG LLLLTAGQVA GTIHVWLAQG DRRAAANLLI EFFSLAMGAC
VLWRLAPRLP ERPGHVISLS AIWPFVITTL LSMSVLGLYQ HEIGLPAISG RYIKAIQELD
RLEGLQERSA EDESKISQLR QKLESDGIPT ELHARRAFFQ RLTSSEPYGF CALANTFAAI
LLVLLVLSLF AWPEVTQQRT MWSWPDLSRP FTWILLSAWL LGGWTLLLTK SRTAVLALAV
TMLLLAVRPL VSQWKAVGEL RVSSRSWLWI FGAGTGSMLL LVGLVVWRGG LDLEVITEAP
KSLRYRLEYW VATLQMLADH PWLGVGPGNF RSVYLSYKLP SSSEEIADPH NMVLEAWSSG
GVLSLAGLLV LAGTGLFALG KGLLNSSPVV NDQTSSERLF IQYSRAIHLP SNWPLWAGAG
SLAIAWWGRF LLDGVFDDAL IVFGVFWTGL YLIIDRWRLN SSMKSETADE SPAAPQELRA
DRDARGFAHS WGDLAFPAAA FALGVNLLAA GGFGMAAILG LWLLLITLST WPVGAVVTQM
REPGEFQAVK AGFGEALISS IFRWGSRLLP GAMVLVMVLS IWGAWPVWMV SQGRIQMSAR
PASTRGAAIR EMVKLAELDE WSPSLAETAG MAWFSNAESS TDWANGEKWM KSASQRDFHS
YRPHEQLARA YFERAVSSPA ERQNFAEKAV ESFEEANRRY RSSSRLLAGA AEALALAGKR
KEASIEANLA LKQNELNRQL GHSDRVLPEE VVERLKRLQA EKLDEDPLNN GRVQ
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