Gene Plim_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2418 
Symbol 
ID9139129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp3152813 
End bp3153484 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630443 
Protein GI296122665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAC CTCGACTTTA CATCCTGCTG CTATTACTGC GTGCGACGGT CGTGTTGCTC 
ATTTTGCGAG TGACGATCGG GATTGTCAGC AATTATCCCG ATTACCTGCC CCCTGATTTC 
GACGCCGAGT TTTTGCGGAA TCGAGAGGGG TACTTTTTTG GAGTCTATGC CTGGGCTTTT 
TATACCCATA TTGTGAGTGG GCCATTAGCG ATTGTGTTCG GGCTGGTACT GCTCAGTGGG 
AAGATCCGCA GCCGGTGGCC TGTGTTTCAT CGCTGGCTGG GCCGAGTGCA GGTCTTGATG 
GTGGTGGGAG TGCTGACGCC GAGCGGCCTG GTGATGTCGT ACTGGGCGGC CTCCGGGCCG 
ATCGGCGGGT TTTCGCTGGC GACACTGTCG ATCCTGACGA GCCTTTGCAT CCTCCAGGGC 
TGGCGAGCGG CTGTGCGGCG GCAATACGCT CGGCACCGCC GGTGGATGGA ACGCACGATG 
ATCCTGCTCT GCTCGGCGAT TACTTTGAGG CTGATTGTGG GGACAGCGCT GGTGACTCAC 
GCGCAAATTT CGTGGATCGA TCCCGAGATG TTTGATCCGG TGGCCAACTG GCTCAGTTGG 
GTGGTGCCAC TTTTGATTTA CGAGAGCTGG TCTCGAAACT GGCGGCAGAA GGGGGCTTTC 
CCGCAACACT GA
 
Protein sequence
MSEPRLYILL LLLRATVVLL ILRVTIGIVS NYPDYLPPDF DAEFLRNREG YFFGVYAWAF 
YTHIVSGPLA IVFGLVLLSG KIRSRWPVFH RWLGRVQVLM VVGVLTPSGL VMSYWAASGP 
IGGFSLATLS ILTSLCILQG WRAAVRRQYA RHRRWMERTM ILLCSAITLR LIVGTALVTH 
AQISWIDPEM FDPVANWLSW VVPLLIYESW SRNWRQKGAF PQH