| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2368 |
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| Symbol | |
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| ID | 9139078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 3081018 |
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| End bp | 3084620 |
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| Gene Length | 3603 bp |
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| Protein Length | 1200 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_003630393 |
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| Protein GI | 296122615 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.464933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTGA TTGACAAAAT TGGTGATGCG ACAAATGCGG TCATCAGCGG TGTGGAACGG
ACTCTCACCC GGTTGTTCGG CTCATCGAAC GAGCGGCGTG TGCGGCAGAT TGGCTTTGTG
CGCGATCGCC AGGGGGCCAC AACGATCACT CCGGGATCCA CGCTGGATCA GATCAATCAG
CTTGAACCCG TCATGGAAAA GCTAACGGAT GACGAGCTGA AGCAGACCAC TTCCAGGCTC
AGAGCCAAAT TGAGTGCGGG TCAGACACTC GATGACATAC TGCCGGAAGC CTTCGCTGCG
GTACGCGAAG GTGGCAAGCG TTTCATGCGA ATGCGTCATT ACGACGTGCA GATGGTGGGG
GGCTTTATCC TTCACAAAGG CATGATTGCC GAAATGATGA CGGGGGAAGG TAAGACGCTG
GTTGCGACTT TGCCGGCCTT TCTCAATGGG CTGGCGGGAA GTGTGCATGT CATCACGGTG
AACGACTATC TGGCACTGCG AGATATGGAA TGGATGGCCC CTCTCTATAC GGGACTAGGC
CTGACTGTCG GTGCCATTCA ATCCAACATG CGCGAGCCTG AGCGTCAGAA GGCCTACGCC
TGTGATATTA CCTATGGCAC GAACAACGAG TTTGGCTTCG ATTATCTGCG CGATAACATG
AAGCCGCGTA AAGACCTGCA GGTTCAAAAG CGCCGCCAAT ACGCGATTAT CGACGAAATT
GATAACATTC TGATCGACGA AGCCAGAACC CCGCTCATTA TCTCAGGGCC GGCTCACGAC
GATGTCACGA AGTATCCCAA AGCTCACCGT ATCGGTCTGC AGCTCAAGCG GGATATTCAC
TTTGAAGTCA AAGAAAAAGA ACATACCTGC CATCTGACCG ATGAAGGGAT TCGCTACGCT
GAAGAACTGG CAGGAGTGGA GAGTTTCTAT ACAGCGGGCA ATATGGAATG GCCGCATTTG
ATTGATAACT CACTGCGGGC GATTCATCTC TACAAGCGGG ATGTCAACTA TATTGTCGAG
AATGATGAGA TCATCATTAT TGATGAACAT ACTGGCCGTA AGATGGAAGG CCGTCAGTGG
AGTGATGGCC TGCATCAGGC TGTGCAGGCG AAAGAAAACG TTCGTATTAA AGAAGATACA
CAGACCTTCG CTACGGTGAC ATTACAAAAC TTCTTCAAGC TGTATCCTAA GCTGAGCGGT
ATGACCGGTA CCGCCATGAC GGAAGCCAAC GAGTTCTGGA AGATCTATAA ACTCGATGTG
GTCGCCGTCC CTACAAACAG ACCGACACAG CGCATTAACT ACCCTGATGC GATCTACCGC
ACCGTTAAAG AGAAATGGGA TGCGGTCATC GAAGAAGTGA AGGAAGTTCA CGCGACAGGA
AGACCAGTCC TTGTGGGAAC GGTCTCTATC GAGAACTCGG AGCATTTGAG CCGCAAGCTG
ACACAGCAAG GTGTGAAGCA CAACATGCTC AACGCCAAGT ATCACGAGCG GGAAGCTGAG
ATTATTGCTC AGGCAGGCCG GTTGGGTGCA GTGACGATTT CGACCAATAT GGCCGGTCGT
GGTACGGATA TTATTCTGGG CGGTAACCCT GAATACCTGG CTTGGGATGA GCTAAAGAAC
ACTTATGTTT CGCGACTTGA TGTCCCGAAA TCGGTCTGGA ATGAAACAAC AAAGCGTATT
GCTGTCCGTG AAGGAATGGA CAGCGAAGGA AAAAAAGTTG CCGAGCTGGG TGGCCTGCAT
GTGGTCGGTA CCGAGCGGCA TGACAGCCGG CGAATCGACC TGCAGTTACG CGGTCGTGCG
GGTCGGCAAG GCGACCCGGG TTCCAGCCGG TTCTTCCTGT CGCTCGAAGA CGACCTGATG
CGAAAGTTCG GTGGCGAGTG GGTGAAGGAC TGGCTCACGG CCATGGGGAT GCAGGAAGGT
GAGCGTATTG AAAGCGGTAT GGTCACTTCT CGTATTGAAG CTGCCCAGAA GAAGGTCGAA
GAGCGACACT TCGAATCGCG TAAGCATCTG CTCGAGTATG ACGAAGTCAT GGATGAGCAG
CGCAAACGCG TTTATGGCTA TCGGCAATCA ATTCTCGATG GGGCCATTTG CCGCCCACTG
ATCCTGAATA TGATCGACCG GCAGTTGAAC CGGTGGACGA AGACCTTCCT GAGTCCGCAG
TATCGCTGGG AAACTGCTGC TAACTGGGCG GGACAGAAAT TTGGTGTTCA GGTTGATGCC
AGTGATGTCC GGGATATGGA CTACGACCGG ATGGTTGATT ACCTGCGTGA TCAGGCCGAG
CGGCAGGCGG AAGATCAGAT CCGCGAGCAG ATGGAGGAAA ATCTGCCAGC TGATCTGGAT
GATCGCGAAC GCAACTGGTC GGCGATGAGC CGGTGGGTCA ACAACCACTT CGGCATCAAT
ACCAATGATC GCGAACTGCG TAAAATCGGT ATCGATGAGC TGCAGATTTA TCTCTACCAG
CGGGCGAAAG ATGCCATTGG ACGATATGAG TTTGAACCAT TGACTGAATA TTTGTCTGAA
GACTGGGGAC GCCGCTCATT GGCTGGGTGG ATCCAGCATC AGTTCGGGCT GGATATTCCG
CCACAAGAGT TCGAAGGTCT CGAACCACCG GCAGCGGTAG TTCATATTCG CAGCCGGATT
CTGGATCATT ACACACGTAA AGAGATCACC TTCCCCGTAT CGGTGGGGAT GTCGCAATTC
CTGGCGGAAA CGGGTGGTCA ATCGACAGAG CGCTATGATC GCAGTGGTCT GGTCGCGTGG
TCGAATGCTC GTTTCCATAC ACGCTTTTCA CCGGATCAGT TCGATAATCT CTCTCGAGCA
AGTATCGAGT CGGCTTTGAT TCTGAAGAGT GAGCAGTTTG CGCCACCAGC CGGAATTCTC
GAAGAAATCC AGCAACTGGT GATTCAAACC TGTGGCGAAG TTCCTGAAGA TCGTGATCTC
GACCCTAATA AGGCGAGTGC GAAAACAACA GCGAAAACGC CCAAAGCTCC ATTCCGTCCG
ATCAGCCCCG AGGCGGCACA TCGTCTGGCT CAATGGTCGA ATGATCGGTT TGGATCGGAA
CTCGAAGCCG ATGATTTCGA AGATAAAGAT GTCACCAAGG CGCGCGATTA TCTGATTGAG
CAGTTCACCC GGCGCTATCG ACCGGAACTG CATACTGCTG AGCGGATGCT CATTCTGGAA
TGCCTCGACG GGGCCTGGAA AGATCATCTG TATTACATGG ATCACTTGCG ATCGAACATC
GGACTGGTGG GTTATGCCCA GAAAGATCCG AAGGTCGAGT ACCGCCGCGA GGGGATGCGC
GCCTTCGAGC AGATGTGGGA TCGAATTGGC GATCAGGTGA CGGGTGCCAT TTTCCGCATT
GAGGATGTCA GCCCGGACTT CGTTGGCTCT TTGTGGAGTG TGACTTCAGA AACGCATGCC
GCTCCGGGAT CTGTGGCTGA TCTGTCGGAG GACGGTAGCT CCAACATGGT GGCTCACCGC
GGTGAAGGTG CCAATGGCAG CCCGGTGGTA GAAACCATTC GCAACAGCAG CCAGCGTGTG
GGGCGTAACG ACCCCTGCCC TTGTGGCAGT GGTAAGAAGT TCAAGAAGTG CTGTGGTCAA
TAA
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| Protein sequence | MELIDKIGDA TNAVISGVER TLTRLFGSSN ERRVRQIGFV RDRQGATTIT PGSTLDQINQ
LEPVMEKLTD DELKQTTSRL RAKLSAGQTL DDILPEAFAA VREGGKRFMR MRHYDVQMVG
GFILHKGMIA EMMTGEGKTL VATLPAFLNG LAGSVHVITV NDYLALRDME WMAPLYTGLG
LTVGAIQSNM REPERQKAYA CDITYGTNNE FGFDYLRDNM KPRKDLQVQK RRQYAIIDEI
DNILIDEART PLIISGPAHD DVTKYPKAHR IGLQLKRDIH FEVKEKEHTC HLTDEGIRYA
EELAGVESFY TAGNMEWPHL IDNSLRAIHL YKRDVNYIVE NDEIIIIDEH TGRKMEGRQW
SDGLHQAVQA KENVRIKEDT QTFATVTLQN FFKLYPKLSG MTGTAMTEAN EFWKIYKLDV
VAVPTNRPTQ RINYPDAIYR TVKEKWDAVI EEVKEVHATG RPVLVGTVSI ENSEHLSRKL
TQQGVKHNML NAKYHEREAE IIAQAGRLGA VTISTNMAGR GTDIILGGNP EYLAWDELKN
TYVSRLDVPK SVWNETTKRI AVREGMDSEG KKVAELGGLH VVGTERHDSR RIDLQLRGRA
GRQGDPGSSR FFLSLEDDLM RKFGGEWVKD WLTAMGMQEG ERIESGMVTS RIEAAQKKVE
ERHFESRKHL LEYDEVMDEQ RKRVYGYRQS ILDGAICRPL ILNMIDRQLN RWTKTFLSPQ
YRWETAANWA GQKFGVQVDA SDVRDMDYDR MVDYLRDQAE RQAEDQIREQ MEENLPADLD
DRERNWSAMS RWVNNHFGIN TNDRELRKIG IDELQIYLYQ RAKDAIGRYE FEPLTEYLSE
DWGRRSLAGW IQHQFGLDIP PQEFEGLEPP AAVVHIRSRI LDHYTRKEIT FPVSVGMSQF
LAETGGQSTE RYDRSGLVAW SNARFHTRFS PDQFDNLSRA SIESALILKS EQFAPPAGIL
EEIQQLVIQT CGEVPEDRDL DPNKASAKTT AKTPKAPFRP ISPEAAHRLA QWSNDRFGSE
LEADDFEDKD VTKARDYLIE QFTRRYRPEL HTAERMLILE CLDGAWKDHL YYMDHLRSNI
GLVGYAQKDP KVEYRREGMR AFEQMWDRIG DQVTGAIFRI EDVSPDFVGS LWSVTSETHA
APGSVADLSE DGSSNMVAHR GEGANGSPVV ETIRNSSQRV GRNDPCPCGS GKKFKKCCGQ
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