Gene Plim_2308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2308 
Symbol 
ID9139013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2984227 
End bp2985345 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content53% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_003630333 
Protein GI296122555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCAT CCGATGTCTT TATCGATCCC ACCTCGCGTG GTGTGAATAT CCTCAAGAGT 
GCCGCTCCCA TTCTTGTTGG GATCGCCCTT GCGATTGGGA TTCAGTTTTT GCTTCCCTCG
AGAGTCGGCC TCTACTATTC CCGACTCGTG ATCGATGCTG GGATTGCCAT GATTCTGGCC
GTCTCTTTGA ATATCGTGAA CGGTATGACG GGACAGTTTT CGATTGGTCA TGCAGGCTTC
ATGACGATCG GAGCTTACAC GGCAGGATCC ATCACCTTCT ACAGTTCACT CCTGATCTGG
GGGACAGCCG CCAAGCACGG TTCTTTTTTA GGAAGTGGCG AATGGATGTT CGTCATCGCG
TGCCTGTGCG GCGGAATCAC AGCTTCGATT GCCGGATTTG TAGTTGGCCT TCCTTCGCTG
CGACTGCGGG GAGATTACCT GGCAATTGTG ACGCTTGGTT TCGGTGAGAT TCTGCGCGTC
GTGCTGCAAC AGACAGGCAA AGTGGTGGAT AACGCGGAAA CGATCCGCAA TGCCCCGTTG
GCAACATTCG CCACAGTTCC TGTGGGTGGC GCGATCGGGT TTGATGGTAT CCCGAAATAC
ACCATACTCT TCTGGGTCTA TGCGTTTCTG GCAATCACAG TGATCTTTGC CTATCGCCTG
AAGCGGTCCA GCTTTGGCCG TGCCATGCTT TCTGTCCGTG AGGATGAAAT TGCGGCACAA
GCCATGGGAA TCAATACGTC GAGACAGAAG TTACTGGCGT TTGTTACGGC TGCATTTTTT
GCAGGTGTTG GCGGCGGGCT ACTGGCTCAC GAAAGTGGCG TGATCATTTC GCCCAAGGAT
GCCGGTTTTC AGCGATCCTT TGATTATGTG ATCATGACGG TGCTGGGTGG ACGAGGATCA
ATCACGGGTG TGATGCTCGC GGCAATTCTC CTTTCAGCCT TACCCGAGGT TCTGCGCGAT
TTCGAGCGAT ATCGGATCAT CATCTATGCC GCCCTCCTGA TCTTCATGAT GCTGAGTCGC
CCGCAGGGGC TCTTTGGAAT TCACGAGATC TGGGATTTCT TTCCTAAATC CTGGAAGACC
CTGCCGTGGA AGAAAAGTCC GCGGGAGGAG GCCCAATGA
 
Protein sequence
MPASDVFIDP TSRGVNILKS AAPILVGIAL AIGIQFLLPS RVGLYYSRLV IDAGIAMILA 
VSLNIVNGMT GQFSIGHAGF MTIGAYTAGS ITFYSSLLIW GTAAKHGSFL GSGEWMFVIA
CLCGGITASI AGFVVGLPSL RLRGDYLAIV TLGFGEILRV VLQQTGKVVD NAETIRNAPL
ATFATVPVGG AIGFDGIPKY TILFWVYAFL AITVIFAYRL KRSSFGRAML SVREDEIAAQ
AMGINTSRQK LLAFVTAAFF AGVGGGLLAH ESGVIISPKD AGFQRSFDYV IMTVLGGRGS
ITGVMLAAIL LSALPEVLRD FERYRIIIYA ALLIFMMLSR PQGLFGIHEI WDFFPKSWKT
LPWKKSPREE AQ