| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2255 |
|---|
| Symbol | |
|---|
| ID | 9138960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2908796 |
|---|
| End bp | 2909635 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1571 |
|---|
| Protein accession | YP_003630280 |
|---|
| Protein GI | 296122502 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTTGG TTATCGATAG ACCGTCGGGC GCTCGTTTTG TCAGGGCCAG TCTGCTGACT
GGCTGTATTG GATTACTTTT GCTGGCAGTT TCAGGCCAGA CTCTGGCACA GCAAGCCCCG
GCGGCAGTCA ATACCGCAGC AGAAATCAGT GAAGCCCACC CTCTGGCACC TGCCTTAAAG
CTCGCTTATG AATCTCGCGA AGCGCTGAAG GATGTGGTTG ATTACGACGC GACATTCAGC
AAGCGGGAAT TGATTAACGG AAAACTGAAG CCACAAGTCT GCTATGTTCG CATTCGCAAG
CAGCCTTTCA GTGTCTACAT GAAGTTCATC AAGCCCAATG AAGGGCGTGA GGTGATCTTT
GTCGAGGGGC AGAACAAGAA TATGCTGCAG GGCCATGAGA CGGGCGTCCT GTCGATGATC
GGGACGGTTT CACTCCCGAT TGATGGCCCC GACGCCATGG CTGAAAATCG CTATCCCATT
ACCATGCTCG GCATTCATAG CCTGCTGGAT CAGGTCATCA AGCAGTGGGA GAGTGAAGCC
CGATACGGTG AGGTCGAGGT GAATTTCTAT CGGAATGCCA AACTGGGCAA AGACATCAAT
GTGGAGGTGA TCGAGTCCAC GCACCCCAAG CCTCGGAATC AGTTTCGATT TCACATGACG
AGGCTGTTTC TCGATAAAGC CACCAGGCTG CCACTTCGAG TCGAGCAGTA TGGGTTTCCC
CAGTCGGGCG ATCAGTCTCC ACCGCTGGTC GAAGAGTATT CTTATGTTTC GTTGAGAACG
AATCTGGGGC TGAAAAACAT CGATTTTTCG GTGGATAATC CGCAGTACAA ATTCAAGTGA
|
|---|
| Protein sequence | MWLVIDRPSG ARFVRASLLT GCIGLLLLAV SGQTLAQQAP AAVNTAAEIS EAHPLAPALK
LAYESREALK DVVDYDATFS KRELINGKLK PQVCYVRIRK QPFSVYMKFI KPNEGREVIF
VEGQNKNMLQ GHETGVLSMI GTVSLPIDGP DAMAENRYPI TMLGIHSLLD QVIKQWESEA
RYGEVEVNFY RNAKLGKDIN VEVIESTHPK PRNQFRFHMT RLFLDKATRL PLRVEQYGFP
QSGDQSPPLV EEYSYVSLRT NLGLKNIDFS VDNPQYKFK
|
|---|
| |