Gene Plim_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2254 
Symbol 
ID9138959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2907802 
End bp2908671 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content53% 
IMG OID 
Productpantoate/beta-alanine ligase 
Protein accessionYP_003630279 
Protein GI296122501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGTTG TCGAGACGAT TGCCGAATGT CGCAAGGAGT TATCTAAGCT GCGGCAATTT 
GGAGGACGAA CCGGGTTTGT ACCCACCATG GGAGCGCTCC ATGCCGGCCA TGTCAGCTTG
ATGGAGATCT GTCGCCCACA GGTGGAGATT TCAGTCGCCA GTATCTTCGT CAATCCGACC
CAGTTTGCAC CCACGGAAGA TTTGAGTCGT TATCCGCGAC CCCTGGAACA TGATCTGGAA
TTGTGTCGAG CAAGTGGTGT GGATCTGGTC TTTGTGCCGA CTGTGGCAGA AATGTATCCG
CCACTCGCTC AGACCACGGT GTCGGTCTCC ACTCTAACCA CTCTCTGGGA AGGGCAATTG
CGGCCCACAC ATTTTCAGGG TGTGACCACG GTCGTGACAA AACTCTTCAA TATTGTTCAG
CCCCAAGTCG CTTTCTTTGG ACAGAAGGAT TATCAGCAGC AGGCGATTCT CCGGAGGATG
GTGCAGGATC TGGATCAGCC TGTCAAAATC CGCACTTGCA GCACGATTCG AGAATCTGAT
GGCCTGGCAA TGAGCAGTCG CAATGCTTAT CTGACCAGCG AGCAGCGATC TCAGGCCACT
CAGATTTTTC GTGGTCTCGC GAAATCGGAA AGCCTCTGGC AGGCTGGTGA GCGATCCCCA
GCCGTGCTGG AACATGCCAT TAAAACAACA ATTGCTGAAG TCTCGGCACT CGACATCGAT
TATGTCGCTA TTGTCGATCC CGAAACATTA AAACTACTGG ATACGATTGA TACTGGAGCT
GTGGCCCTGG TGGCCTGCCG ATTAGGAACC ACCCGGCTAA TTGATAATCT GCTCCTGGGG
AATGCGAGAC AGATTGTTGA GAGTGATTGA
 
Protein sequence
MRVVETIAEC RKELSKLRQF GGRTGFVPTM GALHAGHVSL MEICRPQVEI SVASIFVNPT 
QFAPTEDLSR YPRPLEHDLE LCRASGVDLV FVPTVAEMYP PLAQTTVSVS TLTTLWEGQL
RPTHFQGVTT VVTKLFNIVQ PQVAFFGQKD YQQQAILRRM VQDLDQPVKI RTCSTIRESD
GLAMSSRNAY LTSEQRSQAT QIFRGLAKSE SLWQAGERSP AVLEHAIKTT IAEVSALDID
YVAIVDPETL KLLDTIDTGA VALVACRLGT TRLIDNLLLG NARQIVESD