Gene Plim_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2246 
Symbol 
ID9138951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2897901 
End bp2899391 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content52% 
IMG OID 
Productsmall GTP-binding protein 
Protein accessionYP_003630271 
Protein GI296122493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATTC CCAAAGTTGC TATCGTCGGT CGACCCAATG TCGGCAAAAG CTCAATTCTC 
AATTGGCTGG CTCAGAAGAG AATCTCGGTG GTCGACCCCA CCGCTGGTGT CACTCGTGAT
CGAGTCATGT ATCTGATGCA TGAAGGGGAT CGTTATTTTG AACTGGTGGA TACCGGCGGA
ATTGGCATTG TTGATGTTGA CGACCTCAGT AACGAGATCG ACTATCAGAT CAACGTAGGG
ATTCAGGAAG CGGATCTGAT CCTGTTTGTC GTCGATGGTT CAGCCGGTTT AACGGCACTC
GACCTCGAAG TGTCACGAAG GCTGCGCCCG ATTTCCACAC GCAAGCTGGT GGTGGTTAAC
AAGTGCGATT CACCGAAGCT CGATCTTGAG TTGGGGCCCT TCTACGCTCT GGCCGATGGC
CCGATTGTGG TCACGAGTGT TAAAGGAAAC CGAAATCGCA ATGACCTGAT GGCTGCCATC
CTGGAAAATC TTCCTGATGC CAATGCCGAC GAGCAGCAGG ATGGGGAACA GGATACAGCC
GAACCCGAAT TGAAACTGGC CATTGTTGGT CGCCGTAATG TGGGGAAAAG CACCTTCGTG
AATTCGCTGG CTGAGACGGA GCGAATGATC GTCAGCGAAA TTCCCGGTAC AACGCGCGAC
AGTGTCGATG TGCGATTTGA ACTCGATGGG AAATCGTTCG TCGCGATTGA TACACCCGGG
GTTCGCAAGC GAAAGTCTCT GGCGAACGAT ATCGAGTGGT ATGGCCTGGC CAGAGCCAAG
CGCAGTATCC GGCGCGCGAA CGTCGTGCTC ATGTTCTTCG ATTGCACGCA GCCCATCTCA
CGCGTCGATA AACAACTGGT GCATGAAATC TACGAGTATC ACAAACCCTG TATTTTTGTG
GTCAATAAAT GGGATCTGCA TGGCGACCAG GAAATGGAAG CCTGGAATGA GTACCTGCTG
CAGAACTTTG CCAGCATGCG GCATGTCCCT CTGGCCTTCA TTACCGGGAT GACCGGGAAG
AACGTCAAAA AGCTGATCAA TCTTGCACAG TCAATCTTCA AACAGGCATT GATGCGTATT
GGCACAGGCG AACTCAATCG GCTGGTCAAA AAAGCGGTCA AGAACTGGCC GCCACCGATG
CGGCAGAATC GTAACGTTAA GCTGTACTAT GCGACTCAAG TGGCTGCTGA GCCCCCCACC
ATCGTCTTAA AATGTAATGA TGCCAACCTG CTGGACGACA GTTGGAAGCG TTACCTGCTG
GGCGTCTTCC GAGAAGAGCT CCCCTTCAAG GAAGTTCCTA TCAAGCTGTA TTTCCGCAGT
CGAGAGACAG ATTCGGCTGG TCGCATTAAG CCGCAAAACC AGGATGACCG CAACGAAATG
CAGGAAGTCT TCGATTCCGA AGTCGATGAT TTCGAAGATG AAGAAACGCT CTATGATGGC
GAGCAGGATT TTGATGCCGG CCCTGCCAGC GCCCATGATG AACAGGATTA A
 
Protein sequence
MSIPKVAIVG RPNVGKSSIL NWLAQKRISV VDPTAGVTRD RVMYLMHEGD RYFELVDTGG 
IGIVDVDDLS NEIDYQINVG IQEADLILFV VDGSAGLTAL DLEVSRRLRP ISTRKLVVVN
KCDSPKLDLE LGPFYALADG PIVVTSVKGN RNRNDLMAAI LENLPDANAD EQQDGEQDTA
EPELKLAIVG RRNVGKSTFV NSLAETERMI VSEIPGTTRD SVDVRFELDG KSFVAIDTPG
VRKRKSLAND IEWYGLARAK RSIRRANVVL MFFDCTQPIS RVDKQLVHEI YEYHKPCIFV
VNKWDLHGDQ EMEAWNEYLL QNFASMRHVP LAFITGMTGK NVKKLINLAQ SIFKQALMRI
GTGELNRLVK KAVKNWPPPM RQNRNVKLYY ATQVAAEPPT IVLKCNDANL LDDSWKRYLL
GVFREELPFK EVPIKLYFRS RETDSAGRIK PQNQDDRNEM QEVFDSEVDD FEDEETLYDG
EQDFDAGPAS AHDEQD