| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2245 |
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| Symbol | |
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| ID | 9138950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2896515 |
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| End bp | 2897486 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_003630270 |
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| Protein GI | 296122492 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGA GTAGGGAACG GTGGCGATCT TTTGCCGAAG AGATCAGGGA GTGGGGGCCT
CAGGGTTCCC GAAGCGCCTG TACTTTGGCT GAGGCGGAGA GCTATTGTCG AAAGCTGGCC
ACGGGCCATT ATGAGAATTT CCCGCTCGTT TCGCTGCTGT TACCTAAAAA GCTGCATCAG
CCATTTTTTA ATGTTTATGC CTTTTGCCGC TGGTCTGATG ATCTCGGAGA CGAAATCAAC
GATCCCGTTC GATCACTGCA GCTGCTCCAG TGGTGGCGCG AGCAGATGGT CTTATGTCAC
CAGGCGGCCA GCAGTCAGGA GTTATCCGGG GAAATCTCTC TCGCACATCC AGTGATGATT
GCTCTGCAAA AGACCATTCA AGAATTCGGA ATTCCTTTAC AGCCGTTTGT TGATCTGATT
TCCGCGTTCG AGCAGGATCA GTGCCAGACG AGATATGAGA CTTTTGAGGA TCTGCTGAAT
TATTGTGAGA GGAGTGCGAA TCCTGTTGGG AGACTCGTGT TGTACCTCGG CCGGGATGTT
TCGGAGCAGA ATGTCTTCTG GTCAGATGCG ATTTGTACGG GATTGCAACT GGCAAATTTC
TGGCAGGATG TCGCGCGAGA CTATCTGATT GGCAGGATCT ACCTTCCCTT GGCAGAGATG
AAGGAGTTTG GTGTTTCTGA GGAGACGATT CGAGAGAGAA TTTCGACCGA AGCGTTTCAA
AAGTTGATGA CTTTTCAAGT GGAGCGAACG CGTCTCTTCT TTGAAAAGGG AAAGCCACTT
GTGAACCATG TCACCAACGA TTTGAGGCTG GACGTCGATT TGTTTATTCG CGGCGGAGAA
TGCATTCTCG ATAAGATTGC CAGGATCAAA TATCGAGTTC TGGAAACCAG GCCCAAAGTC
ACCAAGTGGG ATGGCGGACG ATTGCTGATC ATGGCGCTGG GGCGAAGTCT TCGGAAAAGG
TTTTTTGGCT GA
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| Protein sequence | MPESRERWRS FAEEIREWGP QGSRSACTLA EAESYCRKLA TGHYENFPLV SLLLPKKLHQ
PFFNVYAFCR WSDDLGDEIN DPVRSLQLLQ WWREQMVLCH QAASSQELSG EISLAHPVMI
ALQKTIQEFG IPLQPFVDLI SAFEQDQCQT RYETFEDLLN YCERSANPVG RLVLYLGRDV
SEQNVFWSDA ICTGLQLANF WQDVARDYLI GRIYLPLAEM KEFGVSEETI RERISTEAFQ
KLMTFQVERT RLFFEKGKPL VNHVTNDLRL DVDLFIRGGE CILDKIARIK YRVLETRPKV
TKWDGGRLLI MALGRSLRKR FFG
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