Gene Plim_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2185 
Symbol 
ID9138889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2818227 
End bp2819111 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630210 
Protein GI296122432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGCC CTCAGCTTGA GGAAAATGAT CCATCAAAAA GTCCTGGAGC GACTCGATCT 
TTGACCGAGA AGCAACTCGA CCAGCTCGTG GAATGGTTTC GCCCGTGGCC ATCTGTGATC
GTGGCTTATT CAGGCGGAGT TGACAGTGCT TTAGTCAGTT GGGGAGCGTT TCAGGCACTG
GGAAGTTCGG CACTCGCCGT GACAGCCCTG AGCCCGAGTG TTTCTGAGAG TGACCGGGAA
CTCTCCGCAG CAGTCGCCCG TGAAATGGGA ATTAAGCATC AGACAATCCA CACACACGAA
ATTGAGCTAG CTGCGTATCG GGCCAATGCA CCAACTCGCT GTTATTTCTG CAAATCCACA
CTCTACAGCA CGATTCGATC GAAATACCCA GCCAGCGAAT TCCCCCTGAT TGTCAATGGC
ACAAACCTCG ACGACCTGGG AGATCATCGC CCAGGACTGA TGGCGGCTGA AGAATTTCAG
ATCCGCAGTC CTCTCGTCGA ACTGGGTTAT AACAAGCAGA TCGTCAGAAA CCTGGCTCAT
CTCGCAGGTT TAACCGTCCA TGATCGACCT GCCAGCCCCT GCCTGGCCAG CAGAATCGCT
TATGGCGTCG AAGTCACTTC CGATCGATTA CTGAGAGTCG AACAGGCCGA AAAATACCTG
CGATCACTCG GCTTTCAGGA ATTCCGAGTC AGGATTGAAC CCGGAGAGCT GGCCCGCATC
GAACTGCATC CCGAGGATCT GACGCAGCTT GTCAGTTCGC CAATGCGTGA AGCATGCGTG
CGAGTCCTGA GCGAACTTGG ATTTCGTCAG ATCTGCCTCG ATCTTGCCGG CTTTCGCTCG
GGCAGCCACA ACGAACTCAT CCAATTGAAT GCAGCCTCGA AGTGA
 
Protein sequence
MNRPQLEEND PSKSPGATRS LTEKQLDQLV EWFRPWPSVI VAYSGGVDSA LVSWGAFQAL 
GSSALAVTAL SPSVSESDRE LSAAVAREMG IKHQTIHTHE IELAAYRANA PTRCYFCKST
LYSTIRSKYP ASEFPLIVNG TNLDDLGDHR PGLMAAEEFQ IRSPLVELGY NKQIVRNLAH
LAGLTVHDRP ASPCLASRIA YGVEVTSDRL LRVEQAEKYL RSLGFQEFRV RIEPGELARI
ELHPEDLTQL VSSPMREACV RVLSELGFRQ ICLDLAGFRS GSHNELIQLN AASK