Gene Plim_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2178 
Symbol 
ID9138882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2807802 
End bp2808974 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content52% 
IMG OID 
Productmethyltransferase small 
Protein accessionYP_003630203 
Protein GI296122425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.599131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAC CGCGCCGATT ACGAAAAGGG GAGGTGGCTC CCCAGTATGT CCCGAAGGTT 
CGACCAGCCG AACAATTGAT GGTCGATGCG CTGGCTGATG TTCAGGGTGA AAGAATCCTG
TGTAACAGTT CGGGGCGGGC ACAATTTGCT TTTGCACTGG CCATCGCAAA GCCACAAAGT
CAGGTGACCT GCTGGTTTCT GGATGTTCAT TTGCGTGATC AGGCCGCATT GGCACCAGCG
GGTGTGCCTG CCAATTTGCA GCTGGTTTGC GAACCCGACT TTCCAGGAAT CGAGTACCAG
ACGATCTGTC TGGTGTTACC TAAAACTGGT GAAGCAGAAC TGACCAGAGA TCTGTTACAG
CAGGCATGTG TTCGTCTGGT CGAGGGGGGA ACTCTCATTG CGACAACTGA TATGAGAGAT
GATCAGTGGT TGCATACGGA GATACAGCGA TTCTTCCCTA AAGTGACTCG TCGGCCCACT
CGTAAAGGTG TGACATATCT GGCAATCAAG ACGGAGTCCC CGAAGAAGCT CAAGAATCAT
GACTGTGAAT TCATGTTTCG AGACGGTGAG CGGCTGATTC GCATGAAAAG TCGCCCAGGT
GTGTTTGCCC ACAGAAAGCT GGATGTCGGA GCACGCACGC TGATCTCGGT GATCGAACCG
ATGGAGCAGG GACAGATTGT TGATCTGGGT TGCGGCAGTG GTGGAGTGGC TGTTGCCGCC
GCCTTGCGAC ATCCGGAACT CGACGTGTTG GCTGTGGATT CGAATCCTCG GGCTATTGAA
TGTACTCAGT GGGCAGCAAA GGAAAACGGA ACCAGTCGAG TGCAGACTCG ATTGGATGCC
ACCGGGAAAT CCTTGGAATC CAACAGCGTG GATGTCGTCT ACGCGAACCC ACCCTATTTC
TCGAATTACA AGATCGCCGG GATTTTCATT GAGACTGCGT TCCGTATTCT CATTCCGGGT
GGTCGAATTT ATATCGTCAC CAAAGCACCT GCCTGGTATG TCGAATCGCT ACCGTTATTG
TTTGAAAATG TGACCAGCGA TCTGATTCGC GGCTACTCGA TTGTCAAAGC CACGAAATCC
ATGAGTGGCA AGGTACCGGC ACCAGCACCT GAGTACGAAG AATACCGCTC TGCCAAGCCT
CGTCGCCGCA AACCGAAGCT TTATGAAGAG TAG
 
Protein sequence
MNSPRRLRKG EVAPQYVPKV RPAEQLMVDA LADVQGERIL CNSSGRAQFA FALAIAKPQS 
QVTCWFLDVH LRDQAALAPA GVPANLQLVC EPDFPGIEYQ TICLVLPKTG EAELTRDLLQ
QACVRLVEGG TLIATTDMRD DQWLHTEIQR FFPKVTRRPT RKGVTYLAIK TESPKKLKNH
DCEFMFRDGE RLIRMKSRPG VFAHRKLDVG ARTLISVIEP MEQGQIVDLG CGSGGVAVAA
ALRHPELDVL AVDSNPRAIE CTQWAAKENG TSRVQTRLDA TGKSLESNSV DVVYANPPYF
SNYKIAGIFI ETAFRILIPG GRIYIVTKAP AWYVESLPLL FENVTSDLIR GYSIVKATKS
MSGKVPAPAP EYEEYRSAKP RRRKPKLYEE