| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2170 |
|---|
| Symbol | |
|---|
| ID | 9138874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2798547 |
|---|
| End bp | 2799929 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_003630195 |
|---|
| Protein GI | 296122417 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTG GCCCTGGCGC CGATTGGCTT CCCGTTTATG AGTATGGTAC GGAATCAGCA
GAGCAGGCTT TACTGACTCT CCGGAAAAAA CTGAGCCCGC GCGGCGATAT TGTCTCTGAT
GCAGGTCGTG CCAGAACCAT CGAACTCTTC GGTGCACCGC TTTCGCCTCG TGAGGTGGCA
ACTCGCATTC TCTCTGAAAT CAAAGAGCAG GGAAGAGAAG CTCTGCTGAA GTATGCTCGC
TTACTCGACA AGCCAGATCT TCAAGACGAC GATCTGCGTG TTCCTCAAGC AGAAATTGAA
GCAGCTCACG CAGCGGTCGA TCGACAATTT CTGTCCACGA TTCGCCGCAT TCGCGAAAAT
GTCTCTGAGT TCCAGTCACG GATTCTCCAC GAAGATGTCC GTCTCGTCAG ACAAGACGGC
CTGGCCCGGG TGGAGTTGAC TCAGAGATAT CTGCCACTCA AAAGGGTTGG TATCTGCGTT
CCCGGCGGTG CCGCAGCTTA TCCCTCGACA ATTCTCATGA CGGCTATCCC CGCCCAGGCT
GCGGGAGTTC AAGAACTGGC AGTCGTGACG CCTCCCACAA AATTTGGCGC TTACAACACC
CACGTTCTGG CCACCTGTGC TGAACTGGGA ATCACAGAAG TTTATCGTGT GGGAGGAGCA
CAGGCGGTCG CCGCACTGGC TTACGGCGTC GAAGGGATTC CCCGGGTCGA TAAAATCGTA
GGCCCGGGCA ATATGTTCGT CGCACTGGCC AAACAACTTG TTTATGGCGA TGTCGATATC
GACAGCATTG CGGGCCCCAG TGAAGTTGTG GTGATTGCCG ATGATTCCGC CACAGCCAGC
TTTGTTGCCA GTGATCTGCT CTCTCAGGCC GAACACAGCC CCGGATCGAG TATTCTGATC
ACCTGGCATC GCCCGCTGAT CGAAGAAGTG CAAGCGGAAA TTCATCGTCA GCTGACTGAT
TTGCCCAGGT CTGAACTGGC CTCAGCGAGC CTGCGAGATT TTGGTGCGAT TGTTCTGGTC
GATTCGCTCG AAACGGCCTG CCAGTTGACC GATGAACTTG CCCCCGAGCA CCTTCATCTG
TCGACGAAAT CGCCTGATCA GTTACTAGAG CGGATTCAAA ATGCCGGCGC TATTTTTTGC
GGACATTACA CTCCCGTTGC ACTGGGCGAT TACTTTGCCG GGCCTTCGCA TGTTCTACCA
ACAGGGGGAA CGGCCCGATT CGCAAATGGG CTCTGTTCGA ATGACTTCCT CAAGCGATCT
TCAGTGATTC GCTTCAATCG TGACGCACTC GATGATGCTG CACAGGATGT TCGCACAATC
GCGACTGTGG AAGGACTGAC GGCGCACAGT CAAAGTGTCG ATATTCGCTT GAAGGATGAA
TAA
|
|---|
| Protein sequence | MTAGPGADWL PVYEYGTESA EQALLTLRKK LSPRGDIVSD AGRARTIELF GAPLSPREVA
TRILSEIKEQ GREALLKYAR LLDKPDLQDD DLRVPQAEIE AAHAAVDRQF LSTIRRIREN
VSEFQSRILH EDVRLVRQDG LARVELTQRY LPLKRVGICV PGGAAAYPST ILMTAIPAQA
AGVQELAVVT PPTKFGAYNT HVLATCAELG ITEVYRVGGA QAVAALAYGV EGIPRVDKIV
GPGNMFVALA KQLVYGDVDI DSIAGPSEVV VIADDSATAS FVASDLLSQA EHSPGSSILI
TWHRPLIEEV QAEIHRQLTD LPRSELASAS LRDFGAIVLV DSLETACQLT DELAPEHLHL
STKSPDQLLE RIQNAGAIFC GHYTPVALGD YFAGPSHVLP TGGTARFANG LCSNDFLKRS
SVIRFNRDAL DDAAQDVRTI ATVEGLTAHS QSVDIRLKDE
|
|---|
| |