Gene Plim_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2168 
Symbol 
ID9138872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2797224 
End bp2798273 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content53% 
IMG OID 
ProductThreonine aldolase 
Protein accessionYP_003630193 
Protein GI296122415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGTCA GAACAATCGA TTTACGCAGC GATACAGTGA CACGGCCGAC TCCCGAGATG 
CGGCGGGTGA TTGCGGAAGC TGAAGTGGGC GATGATATGT TCGGCGAAGA TCCGACAATC
AATCGGCTCG AACAGCGTGT GGCGGAAATG CTGGGTAAGG AAGCTGCTGT TTATGCCTGT
TCAGGAATTC AATCCAATCA GATGGCCTTG CGAGCCCATT GCTCGAGTGG TGACGAAATC
CTGCTCGATG GTTCCTCACA CATCTTTTAT TACGAACAAG GAGCCCCTGC TGCCCTGCAT
GGTGTGACTT GTCGATTGAT TGATGGCGAA GGGGGAATCT TTCGTGCAGA TCAACTGGAA
GGGATGATTC ACGGCCACGA TCAGCATGAA TCGATCACAA AAGTGGTCTG TGTTGAAAAT
ACAACAAATC GCGGTGGTGG CAGACCCTGG CCACTTCAGG CATTTCGTGA AGTCGCCGAT
TGGGCACATG CCCGTCATCT GGCAGTGCAT GTCGATGGCG CGCGTTTGTT CAATGCCTGT
CAGGCTATAG GTTACAGCCC ACGGGAGTTT TGCGAGTTCG CCGATACCGT CTCGATCTGT
TTTTCCAAAG GATTGGGCTG CCCGATGGGT TCCATGCTTG TGGGAAGCCA GCCGATGATG
GCCAGAGCCA GACGTGCCCG TAAGCTCTTT GGTGGCGGCA TTCGGCAGGG CGGGATGATG
GCTGCTTCCG CGTTGTTCGC TCTCGATCAT CATGTCGAGC GATTGAAAGA CGACCATGCG
CATGCTCGCT GGTTAGCGGA ACAGATCGCC AATGTTCCCC AGCTTTCGAT CGATCTGAAG
GCTGTTTCGA CGAATATTGT GATCATCGAA ATTGCCAAAG AGTGGGGCCC TGCTGATCGA
TTCGTCGAAC TTTTGCAGCG GGAAGGTGTC CTTGTGCTGG CCTTTGGCCG CCAGAAAATT
CGTTTGTGCA CACATCTGGA TATTCCCGGC GATTGTTTGC CACGAGTCGT GGAGTCGTTT
CAAACGGTGG CAGCAAGCTC ATGCGATTAA
 
Protein sequence
MNVRTIDLRS DTVTRPTPEM RRVIAEAEVG DDMFGEDPTI NRLEQRVAEM LGKEAAVYAC 
SGIQSNQMAL RAHCSSGDEI LLDGSSHIFY YEQGAPAALH GVTCRLIDGE GGIFRADQLE
GMIHGHDQHE SITKVVCVEN TTNRGGGRPW PLQAFREVAD WAHARHLAVH VDGARLFNAC
QAIGYSPREF CEFADTVSIC FSKGLGCPMG SMLVGSQPMM ARARRARKLF GGGIRQGGMM
AASALFALDH HVERLKDDHA HARWLAEQIA NVPQLSIDLK AVSTNIVIIE IAKEWGPADR
FVELLQREGV LVLAFGRQKI RLCTHLDIPG DCLPRVVESF QTVAASSCD