Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2166 |
Symbol | |
ID | 9138870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2794422 |
End bp | 2796554 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | translation elongation factor G |
Protein accession | YP_003630191 |
Protein GI | 296122413 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCTAT CCCGTTACCG CAACATTGGT GTTTCGGCCC ACATTGACTC CGGCAAAACG ACGCTCTCCG AGCGCATTCT GTTTTACTCC GGCCGTATTC ACTCGATTCA CGAAGTGAAA GGTAAGGACG GCGTCGGGGC TACCATGGAC CACATGGAAC TCGAACGCGA AAAAGGGATC ACGATCACTT CCGCTGCGAC GCAAGTCACG TGGAAGGATT ACACCGTTAA TCTCATCGAC ACTCCTGGCC ACGTGGACTT CACCGTGGAA GTGGAACGCA GTCTGCGCGT GCTCGATGGT GCGATCCTCG TGCTCTGCTC CGTCGGTGGT GTGCAAAGTC AGTCGCTGAC TGTTGACCGC CAGATGAAGC GGTATAAGGT GCCACGCATT GCGTTCATCA ACAAAATGGA TCGTACTGGG GCCAATCCCG AGAAGGTCAT TGGGATGGTG CGCGATAAGC TCATGGTCAA CCCCTGCCCT CTGCAGATTC CCATGGGTCG TGAAGCAGCT TTCGAAGGCG TCATCGATCT TGTCGAAATG CGCGCAGCGT TCTTCGATGG AGAAGACGGC GAAGTCGTTC GCTATGAAGA AATCCCTGCT CAATATGCTG AGAAAGCTGC CGAAGCTCGT CTGTTCATGC TCGAGACACT CTCGATGTTC AATGATGACG TGGCCATGGC GATTCTCGAA GAGCAGCCAC TCTCCGCTGA ACAACTCCGT CCCATCATTC GCGATTGCAC GCTGACACAT AAGATCGTTC CTGTCATGAT GGGCACGGCT TACAAGAACA AGGGTGTGCA GGAATTGCTC GATGCAGTGA CATACTACCT GCCCAGCCCG CTGGATCGCG AACTGTCGGC CATGGACAAC GACATGAAGC CGCCAGCGGA TACTTCGGCC CTTCAGCCAG GTTGGAACCG GGTACCGCTC TCGTCAGATC CTGCTAAGCC GCTCGTCTGT ATGGCCTTCA AGACCGTTGT CGAGCAGTTT GGTCAGTTGA CTTACACCCG TATCTATCAG GGCAAGATCA TTAAGGGTGA TAGCTATGTT AACACCCGTA CGGGCAAGCG AGTGCGCTTT GGCCGACTGG TGCGCATGCA CGCCAACAGC CGTGAAGATA TTGAAACGGG TGAAGCTGGT GACATTGTGG CTCTGGTGGG TGTTGATTGT GCATCGGGGG ATACGTTCTG CGCAGAAGGC ACGAACTATT CGCTGGAAAG CATCTTCGTG CCTGACGCCG TGATCCGTCT CTCGATCGAG CCAGTGAAGC GCGATGGGGC AGACAAGCTC GGCAAAGCTC TGGAACGTTT CCGCCGTGAA GATCCGACTT TCCGCGTTTT GACTGACGAA GAAACTGGTC AGACGCTGAT TGCCGGTATG GGGCAGTTGC ACCTCGATAT TTATGTAGAG CGCATCAAGC GAGAATATGG CGTCGAATGT ATCGTTGGTC AGCCACGTGT GGCTTACCGC GAAACACCGA CCAAGAAGGT GGAATTCAAC TGGAAGCACA AGAAGCAGAC CGGTGGTTCA GGTCAGTTTG CTCACATTGT GGGCTACCTG GAACCATTGC CTGAAGACAG CGTGATGCCT TATGAATTCG TGAATGACGT TTCCGGTGGT CGTATTCCGA AGGAGTATAT TGCTCCAACG GATAAGGGCT TCCAGCGCGG GATCGTCAAG GGGCCACTCT GCGAGTGCGA AGTGGTGAAT GTCCGTATGG TTCTGCAGGA CGGCAGCTAC CACGACGTCG ATTCTTCGGA AATGGCGTTC GACATCTGCG GTTTCGATTG TATGCGTGAT ACGCTCAAGA AGGCCGATAT CGGTCTGCTG GAGCCGATCA TGAAGCTCGA AGTGGAAGTT CCCGAAGAGT TCCAGGGTTC AGTGACAGGG CAGCTCTCCA GCAAGCGTGG TGTGATCAAT TCCTCGGATA CCAACCTGGG AACTGCCGTC ATCAGTGCTG AAGTTCCTCT GTCCATGATG TTCGACTATG CCAACGAACT GCGTTCGATG ACGCAGGGTA AGGGTACGTT CACCATGGAA TTCAGCCGCT ACTCCATGCT GCCACGCAAC CTGGTCGACG AAGTGGTCGA AAAACGCAAG AAGGAAAAAG CTGAACGTCT GGCAAAGACG TAA
|
Protein sequence | MDLSRYRNIG VSAHIDSGKT TLSERILFYS GRIHSIHEVK GKDGVGATMD HMELEREKGI TITSAATQVT WKDYTVNLID TPGHVDFTVE VERSLRVLDG AILVLCSVGG VQSQSLTVDR QMKRYKVPRI AFINKMDRTG ANPEKVIGMV RDKLMVNPCP LQIPMGREAA FEGVIDLVEM RAAFFDGEDG EVVRYEEIPA QYAEKAAEAR LFMLETLSMF NDDVAMAILE EQPLSAEQLR PIIRDCTLTH KIVPVMMGTA YKNKGVQELL DAVTYYLPSP LDRELSAMDN DMKPPADTSA LQPGWNRVPL SSDPAKPLVC MAFKTVVEQF GQLTYTRIYQ GKIIKGDSYV NTRTGKRVRF GRLVRMHANS REDIETGEAG DIVALVGVDC ASGDTFCAEG TNYSLESIFV PDAVIRLSIE PVKRDGADKL GKALERFRRE DPTFRVLTDE ETGQTLIAGM GQLHLDIYVE RIKREYGVEC IVGQPRVAYR ETPTKKVEFN WKHKKQTGGS GQFAHIVGYL EPLPEDSVMP YEFVNDVSGG RIPKEYIAPT DKGFQRGIVK GPLCECEVVN VRMVLQDGSY HDVDSSEMAF DICGFDCMRD TLKKADIGLL EPIMKLEVEV PEEFQGSVTG QLSSKRGVIN SSDTNLGTAV ISAEVPLSMM FDYANELRSM TQGKGTFTME FSRYSMLPRN LVDEVVEKRK KEKAERLAKT
|
| |