| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2160 |
|---|
| Symbol | |
|---|
| ID | 9138864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2783339 |
|---|
| End bp | 2784634 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_003630185 |
|---|
| Protein GI | 296122407 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00531061 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGA CCAAGAGCTC GCCGATTGAT CAACTCTGCG CTCAACTCGA TGAGATTGTG
CTGATCGATC CCCATTCGCA TATCAACCCT CATGCAGCGG CTTCGAAAAA TCTGGGAGAT
ATACTCGGAT ATCATTATTT CACTGAACTG GCCCATTCAG CCGGCATGCC CAGAGAAGTG
ATTGAAGCTC CAGGGATAAC CGCCAAAGAA AAGGTTGGGC GAATCGTTGA AGGTCTTGCA
CACCTGGATA ACACGATCCA GGTCAAATGG CTGATTGAAC TGTGCGAGCG TTTCTTTGGT
TTTCAAGATG ATCGACTGAC TCCAGACAAT TGGGAGGCAT TGTACGATCA CTCAGAAAAG
CTGATGTCGG CACCGGATTG GGAGCAAACC GTCCTGCAGA AAAGTCAACT TGAAGCTGTA
TTTCTGACCA ATGACTTTGA TGATCCACTC ACCGGGTTCG ACACCAAAAA ATACATTCCC
TGTTTAAGAA CTGACGATCT TGTCTTTCAT CTGCAGAAGC CTGAAGTCAG ACAAAGACTG
GCCAAAGCCA CCGGCTTTGA TTGTGCAACC CCCGCCAAGT TGATTCATGC CATCGGGCAG
CTCTTTACCC ATTTCGTTTC CCACGGAGCC AAAGCCTGCG CCATTTCTTT ACCACCTGAT
TTTGAACCGA CTCCCGTCAG TCACGTTGAC GCCGAAGGCC CCTTGAGGGC TGCGTATGCA
GGCCATGTGC TGACGACTGA GCAATCGCAG ATTTTGAGCC GCTTTGTCTT CTGGACAATT
GCGGAATTCT GTTCAGAGCA CCACCTGCCA TTTGACCTCA TGATCGGGGT TAACCGGCGA
GTCTATGAAT CCGGTGTCTA TCAGGGGCAG GACCTGTTCG ATCAGCGGGT CTCGCTGTAT
CAGTACCGCC GCCTGTTCAA TGCCTTCCCG AGAGTCAAGT TCCCGATCTC TGTATTGGCG
CATGCGAGCA ATATGGAACT GGTGAGCTAT GCGTGGATCT TTCCGAACGT GATTGCGAAT
GGACACTGGT GGTATTCGAA CATTCCTGCG TTCATTGAAC CTGATTGCCG CAGCCGTCTG
GAAGCCATTC CTCGCAATAA GAACATTGGC TACTACAGTG ACATGTACAA ACTGGAGTTT
GGCTGGCCGA AGTTCCAGAT GTATCGCCGG GTTCTCGCCA AAGTGCTCTT CGAAGATTTT
GTGGTCGGAC GCCACTGGTC GGAAGAGAGA GCGGTCGAAC TGGGGCGGCA GATCCTTCGA
GGCAACGTAG AGACCATCTT TTCGGGAGCG TGCTAG
|
|---|
| Protein sequence | MIATKSSPID QLCAQLDEIV LIDPHSHINP HAAASKNLGD ILGYHYFTEL AHSAGMPREV
IEAPGITAKE KVGRIVEGLA HLDNTIQVKW LIELCERFFG FQDDRLTPDN WEALYDHSEK
LMSAPDWEQT VLQKSQLEAV FLTNDFDDPL TGFDTKKYIP CLRTDDLVFH LQKPEVRQRL
AKATGFDCAT PAKLIHAIGQ LFTHFVSHGA KACAISLPPD FEPTPVSHVD AEGPLRAAYA
GHVLTTEQSQ ILSRFVFWTI AEFCSEHHLP FDLMIGVNRR VYESGVYQGQ DLFDQRVSLY
QYRRLFNAFP RVKFPISVLA HASNMELVSY AWIFPNVIAN GHWWYSNIPA FIEPDCRSRL
EAIPRNKNIG YYSDMYKLEF GWPKFQMYRR VLAKVLFEDF VVGRHWSEER AVELGRQILR
GNVETIFSGA C
|
|---|
| |