Gene Plim_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2099 
Symbol 
ID9138802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2723982 
End bp2724794 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content56% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003630125 
Protein GI296122347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGCA ATATTTTTGA TTTATCGGAA GATGTCGCCA TTGTGATTGG CGCCACCGGT 
GTTCTGGGTG GCTCGATGGC GAGTGCTCTC GCCGCTCAGG GAGCCCATGT GGTCGTGATG
GGTCGAAACC AGGAACGCGG TGAAGCCCGG GTGGCGTCCA TTCGAGCGGA AGGTGGCCGG
GCCAGCTTTG TATCGGCAGA TGCCGGCCAT GCGGAGTCGT TGTTGCAAGC CCGTCAGGAG
ATTGAGAGCA CTGTCGGAAC TGCGACAATT CTCGTCAATG CGGCAGGTGG CAACCGGCCT
GAGGCGACGC TTCCTCCCGG GGCTGACTTT TGCAAACTCC CGATCAGTGC CTGGAATGAA
GTGTTTGATC TCAACTTGAC GGCTGGTGTA TTGCTCCCCA GTCAGGTTTT CGGTGAGTCA
ATGGTCAAGC GGCAGCGTGG CTCGATTGTC AATATTGCCT CGATGTCAGG CATGATCCCG
CTTTCACGTG TGGTGGCGTA TTCAGCAGCC AAAGCCGCGG TATTGAATCT CACCAAGTTT
CTCGCCCGTG AATGGGCCAC GACCGGTGTG CGTGTGAATG CAATCAGTCC AGGGTTTTTT
CCGGCCGAGC AGAATAAGGC TCTGCTGTTC AATCCCGATG GTAGCTACAC CGCCCGTGGT
CAGCAGATCA TCTCGCATAC ACCGATGGCC CGCTTTGGGA CTGCGGACGA ACTTTCGGGT
GCTGTCGTCT GGCTCGCTTC ATCAACAGCT TCTTCCTTCG TGACGGGTCA GAATATTGTG
GTCGATGGTG GATTTTCTTC AGTCACCATC TGA
 
Protein sequence
MMRNIFDLSE DVAIVIGATG VLGGSMASAL AAQGAHVVVM GRNQERGEAR VASIRAEGGR 
ASFVSADAGH AESLLQARQE IESTVGTATI LVNAAGGNRP EATLPPGADF CKLPISAWNE
VFDLNLTAGV LLPSQVFGES MVKRQRGSIV NIASMSGMIP LSRVVAYSAA KAAVLNLTKF
LAREWATTGV RVNAISPGFF PAEQNKALLF NPDGSYTARG QQIISHTPMA RFGTADELSG
AVVWLASSTA SSFVTGQNIV VDGGFSSVTI