Gene Plim_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2092 
Symbol 
ID9138795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2716730 
End bp2717713 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003630118 
Protein GI296122340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.125641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTTC AAAATCGTAA AGCCTTTACG CTGATTGAAT TGCTGGTCGT CATTGCGATC 
ATTGCGATTC TGATTGCCCT GCTGCTGCCG GCTGTCCAGC AGGCTCGTGA AGCGGCCCGC
CGGACGGAAT GTAAAAACAT TCTCAAGCAA TGGGGGCTCG CACTCCATAA TTACCACGAT
ACATACAATA GCCTCCCCGC GGCAGGTTTT TCGGTAACTG CAGGGACGCC CCCGAATCCT
GGCCAGCATA ATCGCTTCAG TTTTCATGTG CGTGTTCTGC CATTTCTTGA TCAGACCCCA
CTCTATAATC AGTTCGATAT GTCTCGCTTT TATAATGATG CACCCAACTT TGCGTTAAAG
CGTTCCACAA TTCCTGTCCT GCATTGCCCC AGTGCCTTGC TCTCTGACAG GACGTCTGAT
AGCGAAACAG TCACTTATGG CTCAACGAAC AACCAGACTC ATTCGCCCGT ATCGGTACAT
TATCTGGGAG TTGCGGGTGC AAAAGGCTTT TTACCTGGTT CAACAACTGC GTATTACGCC
TCTCTGCCAG CAGTTCCCAA TCTGACGTCT GATCATGGTG GTCTGGCGAC GAATGGTTTA
TTGACCCGAA ATGTCTCGTC AAGATTCAGC GACTGTACTG ATGGTTTGTC GAACACATTC
CTCATGGGTG AGGCCTCAGC CAACGCAGCT TCGGGTTGGA ATCGAACTTT TCGAGCCTGG
ACACAAGGCG TTTCGACAAA CGATAACTCC ACGGCCATGT ATGCCTCCAA GAATATTACG
CATCAGATTG GTTCAAATAC CGGTTGGAGA AGTAATACTG CCGGCAGTCT CTACAATGAT
TCCCGGTTTG GCAGTCAGCA TGTCGGAGGG ACTCATTTTC TCATGGGCGA CGGAACTGTC
CGTTTTGTCT CTGAGAATAT TGACTTTGCT ACCTATCAAG GGGCGGCCAG TCGAGATGGT
GCCGAATCGA TGCAGATTCA ATAA
 
Protein sequence
MLFQNRKAFT LIELLVVIAI IAILIALLLP AVQQAREAAR RTECKNILKQ WGLALHNYHD 
TYNSLPAAGF SVTAGTPPNP GQHNRFSFHV RVLPFLDQTP LYNQFDMSRF YNDAPNFALK
RSTIPVLHCP SALLSDRTSD SETVTYGSTN NQTHSPVSVH YLGVAGAKGF LPGSTTAYYA
SLPAVPNLTS DHGGLATNGL LTRNVSSRFS DCTDGLSNTF LMGEASANAA SGWNRTFRAW
TQGVSTNDNS TAMYASKNIT HQIGSNTGWR SNTAGSLYND SRFGSQHVGG THFLMGDGTV
RFVSENIDFA TYQGAASRDG AESMQIQ