Gene Plim_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2075 
Symbol 
ID9138778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2691268 
End bp2691858 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content52% 
IMG OID 
Producthelix-turn-helix domain protein 
Protein accessionYP_003630101 
Protein GI296122323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.241547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCTC TCTCATCGGA TCTGCCCACG CCCAGTGACG CAATTAGTCA AATGCTTTGT 
CATCGTGTGC GAGAATTAAG ACAGCAGAAT GGCTGGTCAC TCGATCAATT GAGTTCAGCG
AGCGGTGTGA GTCGGTCCAT GCTCAGTCAG ATTGAGAGGA ATCAGGCGAA TCCTACCCTG
GCTGTGACTG CGCGAATCGC TCAGGCTTTC GGGCTGACCA TTGGCCAGTT AGTGGAAACA
CCACATGTGG TTCCAGGTAT TCATGTCATT CGAGGGGATG ACCCCGCGCA TCTGTATCGA
AGCGATGAAG ATTGCGAGAT TCGCACGCTT TCACCTTTGC CGCTGGAAAA GGACGTCGAG
TTTTATCAAC TTCGTATCAA GCCTGGGCGA GCGTTGCGGA GTGAGGCTCA TTTCCAGAAG
ACCCGCGAGT TTATCACTGT CGAACAGGGG CGAATCTGTA TTCACTCTGC CGGTGAACAA
CGAGAACTTG GCAAAGGAGA TTCAGCGAGT TACCGCGCGG ATGTCCCCCA TGCGATTGAA
AATCGAGGCA AAGGAGACGC TTTGACCTTT CTGGTCGTCA TTTATGAGTA G
 
Protein sequence
MTSLSSDLPT PSDAISQMLC HRVRELRQQN GWSLDQLSSA SGVSRSMLSQ IERNQANPTL 
AVTARIAQAF GLTIGQLVET PHVVPGIHVI RGDDPAHLYR SDEDCEIRTL SPLPLEKDVE
FYQLRIKPGR ALRSEAHFQK TREFITVEQG RICIHSAGEQ RELGKGDSAS YRADVPHAIE
NRGKGDALTF LVVIYE