Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2075 |
Symbol | |
ID | 9138778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2691268 |
End bp | 2691858 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | helix-turn-helix domain protein |
Protein accession | YP_003630101 |
Protein GI | 296122323 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.241547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCTC TCTCATCGGA TCTGCCCACG CCCAGTGACG CAATTAGTCA AATGCTTTGT CATCGTGTGC GAGAATTAAG ACAGCAGAAT GGCTGGTCAC TCGATCAATT GAGTTCAGCG AGCGGTGTGA GTCGGTCCAT GCTCAGTCAG ATTGAGAGGA ATCAGGCGAA TCCTACCCTG GCTGTGACTG CGCGAATCGC TCAGGCTTTC GGGCTGACCA TTGGCCAGTT AGTGGAAACA CCACATGTGG TTCCAGGTAT TCATGTCATT CGAGGGGATG ACCCCGCGCA TCTGTATCGA AGCGATGAAG ATTGCGAGAT TCGCACGCTT TCACCTTTGC CGCTGGAAAA GGACGTCGAG TTTTATCAAC TTCGTATCAA GCCTGGGCGA GCGTTGCGGA GTGAGGCTCA TTTCCAGAAG ACCCGCGAGT TTATCACTGT CGAACAGGGG CGAATCTGTA TTCACTCTGC CGGTGAACAA CGAGAACTTG GCAAAGGAGA TTCAGCGAGT TACCGCGCGG ATGTCCCCCA TGCGATTGAA AATCGAGGCA AAGGAGACGC TTTGACCTTT CTGGTCGTCA TTTATGAGTA G
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Protein sequence | MTSLSSDLPT PSDAISQMLC HRVRELRQQN GWSLDQLSSA SGVSRSMLSQ IERNQANPTL AVTARIAQAF GLTIGQLVET PHVVPGIHVI RGDDPAHLYR SDEDCEIRTL SPLPLEKDVE FYQLRIKPGR ALRSEAHFQK TREFITVEQG RICIHSAGEQ RELGKGDSAS YRADVPHAIE NRGKGDALTF LVVIYE
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